iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-108937

Ensembl Protein ID

EFJ04726

UniProt Accession

D8TF35; D8TF35_SELML

Genbank Protein ID

EFJ04726.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377759

Gene Name

SELMODRAFT_432139

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_432139	EFJ04726	EFJ04726

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.50e-09	37.1	186	236

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C +C++++++++  + C+ Cr+w+H  C+k +  ++  + + + Cp+C +
   Q: 186  AFCGICADPHNTSQFWIACDSCRKWYHGSCVKVN-ASKAAGIKSYNCPSCAK 236
           79********************************.999999999******86 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MESPATVEAI FEDFRGRREG IVKALTTDVS IFCDECDPVK DLCLYGLPDG EWKVTLPVEE 60
VPPELPEPSL GINFAKDGMK RTDWLILVAV HSDSWLYSVA FYHAARLHKA DRQRLFGMIN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGTCGC CCGCGACTGT GGAGGCGATC TTCGAGGATT TCCGGGGCAG GCGCGAGGGG 60
ATCGTCAAGG CGCTCACAAC GGGTAGGATT TCGATCGATC CATTCTCTCA TCCCGGTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

smo:SELMODRAFT_432139

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mtr-058517	Medicago truncatula	51.87	3.00e-50	190.00
IUUC-Opr-070692	Ochotona princeps	37.50	5.00e-04	39.30
IUUC-Ogl-077422	Oryza glaberrima	50.00	9.00e-50	189.00
IUUC-Ogu-079021	Oryza glumaepatula	65.12	1.00e-33	135.00
IUUC-Oin-079801	Oryza indica	50.42	1.00e-49	189.00
IUUC-Olo-080963	Oryza longistaminata	50.00	1.00e-15	75.50
IUUC-Oni-082314	Oryza nivara	50.42	1.00e-49	189.00
IUUC-Opu-083359	Oryza punctata	50.00	1.00e-49	188.00
IUUC-Oru-085108	Oryza rufipogon	48.75	8.00e-47	179.00
IUUC-Olu-087829	Ostreococcus lucimarinus	60.31	2.00e-34	138.00
IUUC-Tae-124170	Triticum aestivum	49.19	3.00e-54	204.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence