iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099656

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000343

Gene Name

POPTR_0007s03610g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0007s03610	POPTR_0007s03610.1	POPTR_0007s03610.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-07	32.5	109	151

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++ +++lp C H+fh  C+  w       + + +CPlCr
   Q: 109  CSVCLSEFqdDETLRLLPkCSHAFHIPCIDTW------LRSHTNCPLCR 151
           ********7644499999**************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

LFGVDSSPQQ KLSKIALAMI VLSVITSVLA TCYAIYAKFI RPRRRRSTQR EEEAEIIETR 60
DQFADEDEGR VVDHPIWYIR TVGLQPSVIG SIRVFKYKSG DGLVEGTECS VCLSEFQDDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTATTTGGTG TCGACTCTTC ACCACAGCAA AAGCTTAGCA AGATTGCATT GGCAATGATT 60
GTGTTATCAG TTATAACTAG TGTTCTTGCT ACTTGTTATG CTATCTATGC CAAGTTCATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0007s03610g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043217	Glycine max	51.53	8.00e-48	183.00
IUUC-Ogl-077013	Oryza glaberrima	59.00	7.00e-28	117.00
IUUC-Ogu-078886	Oryza glumaepatula	58.00	1.00e-27	116.00
IUUC-Oin-079205	Oryza indica	59.00	6.00e-28	117.00
IUUC-Ome-081516	Oryza meridionalis	61.54	7.00e-28	117.00
IUUC-Oni-082231	Oryza nivara	59.00	5.00e-28	117.00
IUUC-Osa-085718	Oryza sativa	59.00	5.00e-28	118.00
IUUC-Ppe-101356	Prunus persica	59.88	9.00e-52	196.00
IUUC-Sit-110484	Setaria italica	62.03	1.00e-24	107.00
IUUC-Sar-113229	Sorex araneus	45.59	4.00e-13	69.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence