iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043325

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000835

Gene Name

LOC100795816; GLYMA_02G034200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA02G03890	GLYMA02G03890.1	GLYMA02G03890.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.10e-29	101.8	308	378

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           ++f+CpIslelM+dPv++++G+tydrssI kw++sg+  cP+t+++l+++++vPnl+lrrliq++c +n++
   Q: 308  DDFRCPISLELMSDPVTIETGHTYDRSSILKWFSSGNLMCPKTGKRLSSTEMVPNLVLRRLIQQHCYTNGI 378
           68*****************************************************************9986 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MKTKQNIDSR IQNTKLQHVP FSMIRNTNRS DRRVLTSPVV HPCDNIALST LLPSLITLSN 60
AISNFQHSSF PCNKRNARIA IRLTRLLQPF LHEIRDHHSG LADPATLSLS ELHLTFQKLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCAAACCTA AGTCTCCATG AAAACAAAAC AAAACATAGA TAGTAGAATC CAAAACACTA 60
AACTCCAACA CGTACCTTTT TCCATGATCC GAAACACAAA CAGGTCGGAT CGCCGGGTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100795816

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006337	Arabidopsis lyrata	45.44	5.00e-150	524.00
IUUC-Ath-007598	Arabidopsis thaliana	44.02	3.00e-144	505.00
IUUC-Bol-015352	Brassica oleracea	43.15	6.00e-141	494.00
IUUC-Bra-017789	Brassica rapa	43.89	8.00e-134	471.00
IUUC-Hvu-047353	Hordeum vulgare	41.54	5.00e-110	391.00
IUUC-Mtr-058256	Medicago truncatula	68.53	0.00e+00	817.00
IUUC-Ogl-077133	Oryza glaberrima	39.16	3.00e-100	359.00
IUUC-Ogu-078633	Oryza glumaepatula	39.32	2.00e-100	360.00
IUUC-Oin-079248	Oryza indica	39.32	1.00e-100	360.00
IUUC-Ome-081678	Oryza meridionalis	39.55	3.00e-101	362.00
IUUC-Oni-082545	Oryza nivara	38.81	1.00e-100	360.00
IUUC-Opu-083981	Oryza punctata	40.68	3.00e-113	402.00
IUUC-Sly-111130	Solanum lycopersicum	49.86	1.00e-175	610.00
IUUC-Sar-112919	Sorex araneus	40.32	3.00e-07	48.90
IUUC-Sbi-114188	Sorghum bicolor	39.77	2.00e-107	383.00
IUUC-Tca-120990	Theobroma cacao	55.27	0.00e+00	681.00
IUUC-Tae-123313	Triticum aestivum	41.26	6.00e-122	431.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence