iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-105176

Ensembl Protein ID

ENSRNOP00000017831.5

UniProt Accession

D4ABK2; D4ABK2_RAT

Genbank Protein ID

ENSRNOP00000017831

Protein Name

Ring finger protein 217

Genbank Nucleotide ID

AABR07000906

Gene Name

Rnf217

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000013323.6	ENSRNOT00000017831.5	ENSRNOP00000017831.5

Annotation

mRNA Expression
ArrayExpress
DNA & RNA Element
RAID2
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	91.50	0.00e+00	643.00	IUUC-Hsa-046905

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

XRDGLLLDVL AQRHPPPAKP QVLCSVYCVE SDLPEAPSAE SPSPPESPPQ APPGPIPASP 60
PASFPSSPLS LPADPLSPDG GSIELEFYLA PEPFSVPGLL GAPPYSGLGG VGDPYAPLMV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGCGACGGG CTGCTCCTGG ACGTGCTGGC CCAGCGACAC CCGCCCCCCG CCAAGCCGCA 60
AGTCCTCTGC TCTGTGTACT GCGTGGAGAG CGACCTGCCC GAGGCCCCCT CCGCCGAGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom

Pfam

PF01485--IBR

SMART

SM00647--IBR

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016021--C:integral component of membrane
GO:0000151--C:ubiquitin ligase complex
GO:0046872--F:metal ion binding
GO:0031624--F:ubiquitin conjugating enzyme binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000190	Aegilops tauschii	26.42	1.00e-18	87.00
IUUC-Aml-001424	Ailuropoda melanoleuca	95.69	9.00e-122	429.00
IUUC-Atr-002709	Amborella trichopoda	29.27	9.00e-17	82.40
IUUC-Apl-004119	Anas platyrhynchos	89.56	2.00e-124	437.00
IUUC-Aca-004331	Anolis carolinensis	80.36	1.00e-113	402.00
IUUC-Aly-006445	Arabidopsis lyrata	28.97	7.00e-16	79.00
IUUC-Ame-011391	Astyanax mexicanus	64.42	7.00e-118	417.00
IUUC-Bta-013031	Bos taurus	96.80	3.00e-135	474.00
IUUC-Bci-013593	Botrytis cinerea	26.55	5.00e-17	82.80
IUUC-Bra-018037	Brassica rapa	28.50	1.00e-14	74.70
IUUC-Cja-019367	Callithrix jacchus	97.72	0.00e+00	625.00
IUUC-Cfa-020360	Canis familiaris	95.40	1.00e-139	488.00
IUUC-Cpo-022283	Cavia porcellus	95.67	4.00e-120	423.00
IUUC-Csa-023174	Chlorocebus sabaeus	97.07	2.00e-180	624.00
IUUC-Dre-028219	Danio rerio	55.81	3.00e-108	385.00
IUUC-Dno-029150	Dasypus novemcinctus	97.54	8.00e-144	502.00
IUUC-Eca-034129	Equus caballus	97.54	8.00e-156	542.00
IUUC-Fca-036093	Felis catus	96.40	2.00e-134	471.00
IUUC-Fal-037155	Ficedula albicollis	81.82	1.00e-145	509.00
IUUC-Gmo-039328	Gadus morhua	64.86	4.00e-100	357.00
IUUC-Gga-041198	Gallus gallus	81.76	4.00e-146	511.00
IUUC-Gac-041506	Gasterosteus aculeatus	66.91	1.00e-103	369.00
IUUC-Hsa-046905	Homo sapiens	91.50	0.00e+00	699.00
IUUC-Itr-048769	Ictidomys tridecemlineatus	98.82	2.00e-88	317.00
IUUC-Lch-049864	Latimeria chalumnae	92.31	1.00e-80	291.00
IUUC-Loc-052491	Lepisosteus oculatus	68.14	3.00e-123	435.00
IUUC-Laf-054434	Loxodonta africana	94.67	4.00e-130	457.00
IUUC-Mcc-054775	Macaca mulatta	92.00	0.00e+00	704.00
IUUC-Mtr-058155	Medicago truncatula	26.89	3.00e-17	82.80
IUUC-Mga-059829	Meleagris gallopavo	88.71	2.00e-121	428.00
IUUC-Mmr-061731	Microcebus murinus	92.50	0.00e+00	651.00
IUUC-Mdo-062999	Monodelphis domestica	78.78	7.00e-153	533.00
IUUC-Mmu-063659	Mus musculus	98.73	0.00e+00	659.00
IUUC-Mpu-066110	Mustela putorius furo	97.15	4.00e-153	533.00
IUUC-Mlu-067706	Myotis lucifugus	97.19	7.00e-135	472.00
IUUC-Nle-069289	Nomascus leucogenys	97.39	1.00e-180	625.00
IUUC-Opr-070800	Ochotona princeps	97.60	2.00e-122	431.00
IUUC-Ont-072164	Oreochromis niloticus	71.01	3.00e-109	387.00
IUUC-Oan-073332	Ornithorhynchus anatinus	93.57	5.00e-85	306.00
IUUC-Ocu-074266	Oryctolagus cuniculus	97.54	1.00e-155	541.00
IUUC-Ogu-078368	Oryza glumaepatula	25.00	5.00e-13	69.30
IUUC-Opu-083215	Oryza punctata	26.32	8.00e-19	88.20
IUUC-Ola-087213	Oryzias latipes	67.26	5.00e-106	377.00
IUUC-Oga-088033	Otolemur garnettii	97.39	5.00e-169	586.00
IUUC-Oar-089295	Ovis aries	91.25	0.00e+00	661.00
IUUC-Pan-091768	Papio anubis	97.07	2.00e-180	624.00
IUUC-Psi-093567	Pelodiscus sinensis	83.59	9.00e-149	519.00
IUUC-Ppa-095998	Physcomitrella patens	31.13	8.00e-19	88.60
IUUC-Pfo-096655	Poecilia formosa	66.29	9.00e-113	400.00
IUUC-Pop-099816	Populus trichocarpa	29.90	3.00e-18	86.30
IUUC-Ppe-101728	Prunus persica	27.23	3.00e-16	79.70
IUUC-Pyt-104493	Pyrenophora triticirepentis	28.50	7.00e-17	81.30
IUUC-Sly-111393	Solanum lycopersicum	30.05	1.00e-18	87.80
IUUC-Stu-112779	Solanum tuberosum	29.47	2.00e-19	90.10
IUUC-Sar-113564	Sorex araneus	97.12	2.00e-122	431.00
IUUC-Sbi-114532	Sorghum bicolor	27.27	2.00e-17	83.20
IUUC-Ssc-115296	Sus scrofa	97.19	4.00e-135	473.00
IUUC-Tgu-117362	Taeniopygia guttata	88.67	1.00e-110	391.00
IUUC-Tru-118499	Takifugu rubripes	67.87	4.00e-105	374.00
IUUC-Tni-119677	Tetraodon nigroviridis	67.03	9.00e-102	362.00
IUUC-Tca-121059	Theobroma cacao	28.10	8.00e-17	80.90
IUUC-Tae-123173	Triticum aestivum	25.34	3.00e-16	79.70
IUUC-Tur-126368	Triticum urartu	27.07	2.00e-17	82.80
IUUC-Tme-126901	Tuber melanosporum	25.97	2.00e-12	68.20
IUUC-Vvi-130951	Vitis vinifera	25.69	5.00e-15	75.10
IUUC-Xtr-132796	Xenopus tropicalis	75.85	9.00e-131	460.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence