iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000026197.12	ENSMUST00000160439.7	ENSMUSP00000125086.1
ENSMUSG00000026197.12	ENSMUST00000186227.1	ENSMUSP00000139757.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
microRNA	TRANSFAC	RepTar	RAID2
Protein-protein Interaction
IID	PINA	HINT	Mentha
Protein 3D Structure
PDB	MMDB
Post-translational Modifications (PTMs)
CPLM	dbPAF	PhosphositePlus	dbPTM
Phospho.ELM	mUbiSiDa
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
UBD/Alpha-Helix/UIM	UIM	24160817

Classification

Family	E-value	Score	Start	End
UBD/Alpha-Helix/UIM	4.00e-05	24.3	197	214
UBD/Alpha-Helix/DUIM	8.6e-05	14.3	221	239

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UIM

   S: 1    dEdeeLqlAlalSlqEee 18
           +Ede Lq+Al+lSl E+ 
   Q: 197  SEDEALQRALELSLAEAK 214
           7***************86 PP

UBD/Alpha-Helix/DUIM

   S: 1    dEdeeLqlAlalSlqEeee 19
           +E+++L+lA alS +E+e+
   Q: 221  QEEDDLALAQALSASEAEY 239
           69***************98 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MEFPDLGAHC SEPSCQRLDF LPLKCDACSG IFCADHVAYA QHHCGSAYQK DIQVPVCPLC 60
NVPVPVARGE PPDRAVGEHI DRDCRSDPAQ QKRKIFTNKC ERSGCRQREM MKLTCDRCGR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGCGCGCG AGCCCTCGGG AGGAGGAGTA GGGGCTGCGG GCCGGCGGAC GCTCAGGCTT 60
CGGTAACCTG TGCTGGGCGG GGGAGAGGAA GGGGCGGGGC GGGGAGCCCC CCGGAGTTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0002--3D-structure
KW-0181--Complete proteome
KW-0256--Endoplasmic reticulum
KW-0479--Metal-binding
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003903--UIM_dom
IPR000058--Znf_AN1

PROSITE

PS50330--UIM
PS51039--ZF_AN1

Pfam

PF01428--zf-AN1

SMART

SM00726--UIM
SM00154--ZnF_AN1

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0008270--F:zinc ion binding
GO:0006616--P:SRP-dependent cotranslational protein targeting to membrane, translocation

KEGG

mmu:68818

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002147	Ailuropoda melanoleuca	91.19	1.00e-95	342.00
IUUC-Atr-002965	Amborella trichopoda	32.17	2.00e-26	113.00
IUUC-Aca-005250	Anolis carolinensis	60.73	4.00e-87	314.00
IUUC-Aly-006530	Arabidopsis lyrata	38.69	1.00e-24	106.00
IUUC-Ath-007296	Arabidopsis thaliana	38.69	4.00e-24	104.00
IUUC-Ame-010931	Astyanax mexicanus	54.31	2.00e-70	258.00
IUUC-Bta-013300	Bos taurus	91.09	1.00e-99	355.00
IUUC-Bdi-014089	Brachypodium distachyon	39.42	5.00e-25	108.00
IUUC-Bol-015397	Brassica oleracea	36.65	2.00e-25	108.00
IUUC-Cel-018280	Caenorhabditis elegans	33.92	4.00e-33	134.00
IUUC-Cja-019403	Callithrix jacchus	89.88	3.00e-96	344.00
IUUC-Cfa-020259	Canis familiaris	81.74	7.00e-71	259.00
IUUC-Cpo-021437	Cavia porcellus	88.33	4.00e-96	343.00
IUUC-Cre-022933	Chlamydomonas reinhardtii	37.88	3.00e-22	99.00
IUUC-Csa-023271	Chlorocebus sabaeus	91.05	2.00e-110	391.00
IUUC-Cho-025096	Choloepus hoffmanni	83.97	3.00e-80	291.00
IUUC-Cin-025304	Ciona intestinalis	48.29	1.00e-60	226.00
IUUC-Csv-025895	Ciona savignyi	48.95	1.00e-62	233.00
IUUC-Dre-028319	Danio rerio	57.08	2.00e-72	265.00
IUUC-Dno-029280	Dasypus novemcinctus	85.60	1.00e-104	372.00
IUUC-Dor-030346	Dipodomys ordii	98.04	7.00e-79	285.00
IUUC-Dme-032051	Drosophila melanogaster	44.29	2.00e-49	189.00
IUUC-Ete-032683	Echinops telfairi	87.31	1.00e-92	332.00
IUUC-Eca-033219	Equus caballus	92.05	9.00e-87	312.00
IUUC-Fca-035459	Felis catus	91.05	1.00e-93	335.00
IUUC-Gmo-039200	Gadus morhua	56.74	2.00e-72	265.00
IUUC-Gga-040574	Gallus gallus	60.87	5.00e-58	216.00
IUUC-Gac-042393	Gasterosteus aculeatus	55.41	7.00e-73	266.00
IUUC-Gma-042747	Glycine max	35.64	2.00e-27	115.00
IUUC-Hsa-045816	Homo sapiens	90.27	5.00e-104	370.00
IUUC-Itr-048419	Ictidomys tridecemlineatus	91.86	1.00e-96	346.00
IUUC-Lch-049975	Latimeria chalumnae	56.05	3.00e-75	274.00
IUUC-Lpe-051145	Leersia perrieri	40.15	7.00e-26	110.00
IUUC-Loc-051815	Lepisosteus oculatus	55.96	4.00e-68	251.00
IUUC-Laf-053990	Loxodonta africana	90.27	8.00e-106	376.00
IUUC-Mcc-054856	Macaca mulatta	91.05	2.00e-107	381.00
IUUC-Meu-056582	Macropus eugenii	78.21	1.00e-86	312.00
IUUC-Mtr-057738	Medicago truncatula	33.97	5.00e-24	104.00
IUUC-Mla-058922	Melampsora laricipopulina	30.37	4.00e-19	88.60
IUUC-Mga-059873	Meleagris gallopavo	58.38	3.00e-58	217.00
IUUC-Mmr-060850	Microcebus murinus	83.87	6.00e-91	326.00
IUUC-Mdo-062273	Monodelphis domestica	79.46	3.00e-87	314.00
IUUC-Mac-065263	Musa acuminata	41.01	2.00e-27	115.00
IUUC-Mpu-066886	Mustela putorius furo	92.20	1.00e-102	365.00
IUUC-Mlu-067437	Myotis lucifugus	92.25	4.00e-97	347.00
IUUC-Nle-069060	Nomascus leucogenys	84.82	2.00e-100	358.00
IUUC-Opr-070734	Ochotona princeps	100.00	5.00e-26	111.00
IUUC-Ont-071294	Oreochromis niloticus	54.70	8.00e-74	270.00
IUUC-Oan-073472	Ornithorhynchus anatinus	66.45	7.00e-64	236.00
IUUC-Ocu-074822	Oryctolagus cuniculus	87.16	3.00e-100	357.00
IUUC-Oba-075558	Oryza barthii	34.38	4.00e-22	98.60
IUUC-Obr-076669	Oryza brachyantha	40.15	1.00e-25	110.00
IUUC-Ogl-077525	Oryza glaberrima	40.15	7.00e-26	110.00
IUUC-Ogu-078691	Oryza glumaepatula	38.69	3.00e-22	99.00
IUUC-Oin-079294	Oryza indica	40.15	7.00e-26	110.00
IUUC-Olo-080719	Oryza longistaminata	34.38	4.00e-22	98.60
IUUC-Ome-081472	Oryza meridionalis	40.15	4.00e-26	111.00
IUUC-Oni-082176	Oryza nivara	34.38	3.00e-22	99.00
IUUC-Opu-084000	Oryza punctata	40.15	6.00e-26	111.00
IUUC-Oru-084635	Oryza rufipogon	34.38	3.00e-22	99.00
IUUC-Osa-085871	Oryza sativa	36.36	2.00e-12	65.10
IUUC-Ola-086751	Oryzias latipes	55.13	4.00e-76	277.00
IUUC-Oga-088102	Otolemur garnettii	94.16	4.00e-111	394.00
IUUC-Oar-089554	Ovis aries	91.47	8.00e-101	359.00
IUUC-Ptr-091323	Pan troglodytes	89.96	2.00e-93	335.00
IUUC-Pan-091947	Papio anubis	90.87	4.00e-106	377.00
IUUC-Pma-094406	Petromyzon marinus	52.58	8.00e-57	213.00
IUUC-Ppa-095809	Physcomitrella patens	37.65	2.00e-27	115.00
IUUC-Pfo-097080	Poecilia formosa	53.42	8.00e-72	263.00
IUUC-Pab-098185	Pongo abelii	90.66	6.00e-105	373.00
IUUC-Pca-101060	Procavia capensis	77.61	7.00e-88	316.00
IUUC-Ppe-101158	Prunus persica	35.03	2.00e-23	103.00
IUUC-Pva-102121	Pteropus vampyrus	91.47	1.00e-97	348.00
IUUC-Rno-105624	Rattus norvegicus	96.50	2.00e-99	355.00
IUUC-Sha-107641	Sarcophilus harrisii	77.50	1.00e-73	269.00
IUUC-Smo-108887	Selaginella moellendorffii	44.78	1.00e-28	118.00
IUUC-Sit-110009	Setaria italica	39.42	4.00e-25	108.00
IUUC-Sly-111532	Solanum lycopersicum	39.42	7.00e-25	107.00
IUUC-Stu-111948	Solanum tuberosum	37.96	4.00e-24	105.00
IUUC-Sar-113765	Sorex araneus	83.06	2.00e-86	311.00
IUUC-Sbi-114277	Sorghum bicolor	40.15	1.00e-25	110.00
IUUC-Ssc-115662	Sus scrofa	90.00	4.00e-98	350.00
IUUC-Tgu-117071	Taeniopygia guttata	66.25	3.00e-71	261.00
IUUC-Tru-118465	Takifugu rubripes	57.08	8.00e-74	270.00
IUUC-Tsy-119178	Tarsius syrichta	90.34	7.00e-94	336.00
IUUC-Tni-119666	Tetraodon nigroviridis	57.27	1.00e-71	262.00
IUUC-Tae-122941	Triticum aestivum	39.42	3.00e-25	108.00
IUUC-Tur-126529	Triticum urartu	40.15	2.00e-25	108.00
IUUC-Ttr-129143	Tursiops truncatus	92.25	3.00e-102	364.00
IUUC-Vvi-131235	Vitis vinifera	40.88	5.00e-27	114.00
IUUC-Xtr-131949	Xenopus tropicalis	57.67	4.00e-68	251.00
IUUC-Xma-134060	Xiphophorus maculatus	54.31	3.00e-74	271.00
IUUC-Yli-134655	Yarrowia lipolytica	36.11	2.00e-01	27.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence