iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095820

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545177

Gene Name

PHYPADRAFT_8852

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S288_40V6	PP1S288_40V6.1	PP1S288_40V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.30e-06	26.4	228	284

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwl..asggktcPvtrqplteedlvPn 58
           + f+C I ++  ++ vv+++G+ +   ++ +wl   s++k+cPv++ +++e +++P 
   Q: 228  DSFKCNICFQKANEAVVTCCGHLFCWPCLYRWLhvHSYHKECPVCKGSVAEYNITPI 284
           68*******************************9999*****************997 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MATPVPGEDN HSTTEQGPQI SGPESETSVS RHVDLTLNAA TPIPIYNPYM QQVGPQNYPS 60
FQRADSHQSY YDQQDYASNS IHEGNVYTAP AELRRGYQEY HPPAEEQIQG YRGRQQQNNL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAACCC CAGTGCCTGG AGAAGACAAT CACAGCACTA CAGAACAAGG CCCTCAGATT 60
TCTGGCCCTG AGTCGGAAAC ATCAGTTTCG AGACATGTAG ATTTGACCCT CAATGCTGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_8852

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014417	Brachypodium distachyon	61.70	1.00e-30	127.00
IUUC-Obr-076527	Oryza brachyantha	61.32	4.00e-32	131.00
IUUC-Oin-079645	Oryza indica	63.74	6.00e-31	128.00
IUUC-Olo-080972	Oryza longistaminata	64.84	8.00e-32	130.00
IUUC-Pma-094260	Petromyzon marinus	31.15	1.00e-06	47.40
IUUC-Sre-115213	Sporisorium reilianum	39.58	3.00e-06	46.20
IUUC-Tae-125367	Triticum aestivum	62.77	9.00e-32	130.00
IUUC-Tur-126535	Triticum urartu	62.77	6.00e-32	130.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence