iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132335

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin protein ligase E3 component n-recognin 3

Genbank Nucleotide ID

AAMC01035819

Gene Name

ubr3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000018856.2	ENSXETT00000040888.2	ENSXETP00000040888.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.80e-06	27.2	367	422

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 4    Cledf....kdgplvlpCgHvfhadClqkw.........pglknssskefrCPlCr 46
           Cl++     + g++v  CgH+ h dC + +          +  ++ ++ef+CPlCr
   Q: 367  CLQSVsvgwEGGVYVQTCGHTLHIDCHKSYmeslrndqvLQGFSVDKGEFTCPLCR 422
           22222444444689999*********999999999999999999***********8 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MSEHVLCMVL YLIELGLENS PEDESCEENF AGPDRCHDSW FPGSNLLCNM RHFINYVRVR 60
VPETAPEVRR EPPASTSTDG PSSAQNSGTA QVFSLVAERR KKFQEIINRN NSEANQVVRP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCAGAAC ACGTTCTTTG TATGGTTTTG TATCTCATAG AGCTTGGGCT AGAAAATTCT 60
CCCGAGGACG AGTCATGTGA AGAGGTAAAA TGGGCACATG TTTCATTAAT AAAGCCCAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0732--Signal

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Gene Ontology

GO:0005737--C:cytoplasm
GO:0000151--C:ubiquitin ligase complex
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0071596--P:ubiquitin-dependent protein catabolic process via the N-end rule pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002071	Ailuropoda melanoleuca	75.91	0.00e+00	1080.00
IUUC-Apl-003859	Anas platyrhynchos	79.41	0.00e+00	1302.00
IUUC-Aca-004832	Anolis carolinensis	78.64	0.00e+00	1404.00
IUUC-Bra-016873	Brassica rapa	26.74	9.00e-35	143.00
IUUC-Cel-018255	Caenorhabditis elegans	35.29	6.00e-25	110.00
IUUC-Cja-019761	Callithrix jacchus	74.57	0.00e+00	1080.00
IUUC-Cpo-021462	Cavia porcellus	75.30	0.00e+00	1115.00
IUUC-Cin-025110	Ciona intestinalis	34.90	2.00e-54	208.00
IUUC-Csv-026296	Ciona savignyi	32.35	3.00e-51	195.00
IUUC-Dno-029345	Dasypus novemcinctus	75.57	0.00e+00	1121.00
IUUC-Dme-032215	Drosophila melanogaster	42.86	2.00e-48	189.00
IUUC-Gmo-038976	Gadus morhua	66.71	0.00e+00	965.00
IUUC-Gma-043622	Glycine max	28.15	4.00e-28	121.00
IUUC-Hvu-047101	Hordeum vulgare	42.65	4.00e-28	117.00
IUUC-Itr-048464	Ictidomys tridecemlineatus	77.07	0.00e+00	1421.00
IUUC-Lch-050205	Latimeria chalumnae	75.47	0.00e+00	1348.00
IUUC-Mtr-058538	Medicago truncatula	25.42	1.00e-28	123.00
IUUC-Mga-060032	Meleagris gallopavo	80.25	0.00e+00	1469.00
IUUC-Mdo-062136	Monodelphis domestica	78.36	0.00e+00	1364.00
IUUC-Mac-064773	Musa acuminata	42.86	2.00e-29	125.00
IUUC-Oba-075295	Oryza barthii	47.50	2.00e-18	89.00
IUUC-Obr-076117	Oryza brachyantha	41.48	4.00e-27	117.00
IUUC-Ogl-077571	Oryza glaberrima	42.22	1.00e-27	119.00
IUUC-Ogu-078497	Oryza glumaepatula	47.50	2.00e-18	89.00
IUUC-Oin-079343	Oryza indica	47.50	2.00e-18	89.00
IUUC-Olo-081056	Oryza longistaminata	47.50	2.00e-18	89.00
IUUC-Oni-083099	Oryza nivara	47.50	2.00e-18	89.00
IUUC-Opu-083202	Oryza punctata	42.22	1.00e-27	120.00
IUUC-Oru-084471	Oryza rufipogon	47.50	2.00e-18	89.00
IUUC-Osa-085336	Oryza sativa	42.22	6.00e-28	119.00
IUUC-Ola-086515	Oryzias latipes	69.61	0.00e+00	1020.00
IUUC-Ppa-095715	Physcomitrella patens	24.66	2.00e-42	169.00
IUUC-Pab-098783	Pongo abelii	75.33	0.00e+00	1020.00
IUUC-Pop-099496	Populus trichocarpa	37.93	5.00e-27	117.00
IUUC-Pca-101009	Procavia capensis	72.57	0.00e+00	1283.00
IUUC-Sha-107406	Sarcophilus harrisii	79.27	0.00e+00	1392.00
IUUC-Sly-111701	Solanum lycopersicum	42.54	1.00e-25	112.00
IUUC-Sar-112948	Sorex araneus	69.96	0.00e+00	1003.00
IUUC-Tni-120560	Tetraodon nigroviridis	68.98	0.00e+00	998.00
IUUC-Tae-125358	Triticum aestivum	45.08	1.00e-26	116.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence