iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s16000	POPTR_0003s16000.1	POPTR_0003s16000.1
POPTR_0003s16000	POPTR_0003s16000.2	POPTR_0003s16000.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-07	32.5	179	219

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++Cl+++  +++ + ++C H+fh+ C++ w        ++ +CP+C
   Q: 179  CPTCLDEYtpENPKIMTRCSHHFHLGCIYEW------LERSESCPIC 219
           ******998777445699*************......9********* PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGAFCCCLSS DEHEEHAYPG SSIYRHCICL RFFFHQLLGG YGTMFHRLEG RTVSPTQGGN 60
FLASTGVGTG LPDSSANDTQ LSSSRPVPSD NDQRYDRLQR YGLVSRKSMT HFQEESQSLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGGATAATT ATCTGCTCAG TATTTTCTCT TTAGATCTGA TGCAATACTA CTTTCAAAAT 60
ATTACGTCTT AACGTAGAAT AGTCAACAAA ATTTTATTGA TTCTATTTTT TTTTTTCTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

KEGG

pop:POPTR_0003s16000g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003101	Amborella trichopoda	58.22	2.00e-65	241.00
IUUC-Bdi-014305	Brachypodium distachyon	55.84	5.00e-70	256.00
IUUC-Hvu-047238	Hordeum vulgare	56.71	8.00e-72	262.00
IUUC-Lpe-050881	Leersia perrieri	53.57	1.00e-54	206.00
IUUC-Mac-065567	Musa acuminata	59.91	2.00e-74	271.00
IUUC-Oba-075350	Oryza barthii	54.12	5.00e-55	206.00
IUUC-Obr-076662	Oryza brachyantha	55.41	6.00e-67	246.00
IUUC-Ogl-076952	Oryza glaberrima	54.98	9.00e-70	255.00
IUUC-Ogu-078019	Oryza glumaepatula	54.12	5.00e-55	206.00
IUUC-Oin-079155	Oryza indica	54.98	9.00e-70	255.00
IUUC-Olo-080258	Oryza longistaminata	54.64	2.00e-55	208.00
IUUC-Ome-081642	Oryza meridionalis	53.81	7.00e-65	239.00
IUUC-Oni-082523	Oryza nivara	54.12	8.00e-55	206.00
IUUC-Oru-084804	Oryza rufipogon	54.12	5.00e-55	206.00
IUUC-Osa-085985	Oryza sativa	54.98	9.00e-70	255.00
IUUC-Sit-109989	Setaria italica	56.28	3.00e-72	263.00
IUUC-Sbi-113909	Sorghum bicolor	54.55	5.00e-66	243.00
IUUC-Tae-124441	Triticum aestivum	56.28	7.00e-71	259.00
IUUC-Tur-126641	Triticum urartu	56.02	6.00e-54	203.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence