iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-047866

Ensembl Protein ID

ENSSTOP00000020294.1

UniProt Accession

I3N7E8; I3N7E8_ICTTR

Genbank Protein ID

ENSSTOP00000020294

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01036871

Gene Name

TDRD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000028945.1	ENSSTOT00000025082.1	ENSSTOP00000020294.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	9.50e-09	35.1	274	312

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLldg 41
           de +l  ++eMGF++e+ +qaL +++nnleaA++ Ll+g
   Q: 274  DEKALKHITEMGFSKEASRQALMDNGNNLEAALNVLLNG 312
           78999*******************************986 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

YLSDEGIEAC TSSPDKVNVN DIILIALNTD LRTIGKKFLP SDINGGKVEK LEGPCVLQIQ 60
KIRNVAAPKD NEESQAAPRM LRLQMTDGHT SCIAVEFSYM PKISLNTPPG TKVKLSGIVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATCTTTCAG ATGAAGGCAT TGAAGCTTGC ACAAGTTCTC CTGACAAAGT CAATGTAAAT 60
GACATCATCC TGATTGCTCT CAATGTAGGT TACGTTTATT AACTTACAAA CATTTTGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR033472--DUF1767
IPR013894--RMI1_N
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF08585--RMI1_N
PF00567--TUDOR
PF00627--UBA

SMART

SM01161--DUF1767
SM00333--TUDOR
SM00165--UBA

Gene Ontology

GO:0035145--C:exon-exon junction complex
GO:0003682--F:chromatin binding
GO:0003723--F:RNA binding
GO:0003713--F:transcription coactivator activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	35.71	6.00e-18	84.70
IUUC-Aml-001751	Ailuropoda melanoleuca	93.03	0.00e+00	1325.00
IUUC-Atr-002788	Amborella trichopoda	33.13	3.00e-21	95.90
IUUC-Apl-004055	Anas platyrhynchos	75.37	0.00e+00	940.00
IUUC-Aca-004367	Anolis carolinensis	72.50	0.00e+00	1024.00
IUUC-Aly-006072	Arabidopsis lyrata	36.31	1.00e-23	104.00
IUUC-Ath-007491	Arabidopsis thaliana	35.67	3.00e-23	102.00
IUUC-Ame-011439	Astyanax mexicanus	49.18	3.00e-165	575.00
IUUC-Bta-012894	Bos taurus	87.12	0.00e+00	1249.00
IUUC-Bdi-014462	Brachypodium distachyon	32.58	4.00e-22	98.60
IUUC-Bol-015343	Brassica oleracea	38.82	3.00e-23	102.00
IUUC-Bra-016787	Brassica rapa	37.11	8.00e-23	100.00
IUUC-Cel-018154	Caenorhabditis elegans	36.04	4.00e-28	119.00
IUUC-Cja-019364	Callithrix jacchus	90.78	0.00e+00	1150.00
IUUC-Cfa-021166	Canis familiaris	90.86	0.00e+00	1277.00
IUUC-Cpo-021678	Cavia porcellus	81.89	0.00e+00	963.00
IUUC-Csa-023299	Chlorocebus sabaeus	90.68	0.00e+00	1333.00
IUUC-Cho-024694	Choloepus hoffmanni	93.73	1.00e-136	480.00
IUUC-Cin-025191	Ciona intestinalis	41.59	1.00e-41	162.00
IUUC-Csv-026348	Ciona savignyi	50.98	2.00e-12	63.50
IUUC-Dre-028715	Danio rerio	50.07	2.00e-167	582.00
IUUC-Dno-030091	Dasypus novemcinctus	88.36	0.00e+00	1302.00
IUUC-Dor-030807	Dipodomys ordii	79.88	0.00e+00	987.00
IUUC-Dme-031770	Drosophila melanogaster	32.97	2.00e-41	164.00
IUUC-Ete-032507	Echinops telfairi	68.65	0.00e+00	689.00
IUUC-Eca-033406	Equus caballus	89.73	0.00e+00	1026.00
IUUC-Eeu-034600	Erinaceus europaeus	79.88	0.00e+00	953.00
IUUC-Fca-035916	Felis catus	92.05	0.00e+00	1308.00
IUUC-Fal-036658	Ficedula albicollis	74.86	0.00e+00	989.00
IUUC-Gmo-038974	Gadus morhua	56.80	2.00e-102	366.00
IUUC-Gga-040195	Gallus gallus	75.14	0.00e+00	1063.00
IUUC-Gac-042537	Gasterosteus aculeatus	47.04	1.00e-160	560.00
IUUC-Gma-044234	Glycine max	40.00	8.00e-25	107.00
IUUC-Ggo-044715	Gorilla gorilla	89.28	0.00e+00	1174.00
IUUC-Hsa-045814	Homo sapiens	91.51	0.00e+00	1344.00
IUUC-Hvu-047365	Hordeum vulgare	31.29	6.00e-18	85.10
IUUC-Lch-050393	Latimeria chalumnae	62.20	0.00e+00	813.00
IUUC-Lpe-050691	Leersia perrieri	31.46	5.00e-23	101.00
IUUC-Loc-052859	Lepisosteus oculatus	58.16	0.00e+00	701.00
IUUC-Laf-053953	Loxodonta africana	88.14	0.00e+00	852.00
IUUC-Mcc-055846	Macaca mulatta	90.27	0.00e+00	1330.00
IUUC-Meu-056790	Macropus eugenii	69.02	0.00e+00	853.00
IUUC-Mtr-058749	Medicago truncatula	40.13	8.00e-22	97.80
IUUC-Mla-058959	Melampsora laricipopulina	41.18	2.00e-06	46.20
IUUC-Mga-059656	Meleagris gallopavo	74.73	0.00e+00	987.00
IUUC-Mmr-061089	Microcebus murinus	89.83	0.00e+00	1237.00
IUUC-Mdo-063043	Monodelphis domestica	68.23	0.00e+00	750.00
IUUC-Mmu-063654	Mus musculus	84.25	0.00e+00	1164.00
IUUC-Mac-064947	Musa acuminata	37.66	1.00e-19	90.50
IUUC-Mpu-066115	Mustela putorius furo	90.86	0.00e+00	1044.00
IUUC-Mlu-066974	Myotis lucifugus	86.13	0.00e+00	1166.00
IUUC-Nle-069184	Nomascus leucogenys	90.68	0.00e+00	1333.00
IUUC-Opr-070770	Ochotona princeps	80.34	0.00e+00	1029.00
IUUC-Ont-072040	Oreochromis niloticus	60.83	9.00e-139	487.00
IUUC-Oan-073448	Ornithorhynchus anatinus	85.19	4.00e-72	263.00
IUUC-Ocu-074405	Oryctolagus cuniculus	91.37	0.00e+00	1304.00
IUUC-Oba-075977	Oryza barthii	32.26	3.00e-14	72.40
IUUC-Obr-076298	Oryza brachyantha	33.97	2.00e-20	93.20
IUUC-Ogl-077706	Oryza glaberrima	32.90	2.00e-14	72.80
IUUC-Ogu-078381	Oryza glumaepatula	32.70	4.00e-15	75.50
IUUC-Oin-080150	Oryza indica	33.33	1.00e-14	74.30
IUUC-Ome-081153	Oryza meridionalis	32.50	6.00e-14	71.60
IUUC-Oni-083115	Oryza nivara	32.70	2.00e-14	73.20
IUUC-Opu-083860	Oryza punctata	32.91	1.00e-20	93.60
IUUC-Oru-084859	Oryza rufipogon	33.33	1.00e-14	73.90
IUUC-Osa-085567	Oryza sativa	33.33	2.00e-13	70.10
IUUC-Ola-087049	Oryzias latipes	48.09	1.00e-172	599.00
IUUC-Oga-088455	Otolemur garnettii	90.82	0.00e+00	1314.00
IUUC-Oar-090096	Ovis aries	89.86	0.00e+00	1305.00
IUUC-Ptr-090974	Pan troglodytes	90.17	0.00e+00	1190.00
IUUC-Pan-092657	Papio anubis	90.27	0.00e+00	1330.00
IUUC-Psi-093113	Pelodiscus sinensis	74.58	0.00e+00	941.00
IUUC-Ppa-095466	Physcomitrella patens	39.31	2.00e-24	106.00
IUUC-Pfo-096631	Poecilia formosa	48.67	1.00e-171	596.00
IUUC-Pab-098070	Pongo abelii	91.51	0.00e+00	1347.00
IUUC-Pop-099235	Populus trichocarpa	34.86	5.00e-23	102.00
IUUC-Pca-101032	Procavia capensis	81.26	0.00e+00	1046.00
IUUC-Ppe-101793	Prunus persica	34.50	3.00e-24	105.00
IUUC-Pva-102290	Pteropus vampyrus	88.17	0.00e+00	1140.00
IUUC-Rno-105080	Rattus norvegicus	82.95	0.00e+00	983.00
IUUC-Sha-107598	Sarcophilus harrisii	79.16	0.00e+00	1120.00
IUUC-Sit-110735	Setaria italica	30.32	2.00e-19	89.70
IUUC-Sly-111126	Solanum lycopersicum	40.13	1.00e-21	97.10
IUUC-Stu-112780	Solanum tuberosum	37.42	8.00e-25	107.00
IUUC-Sar-113418	Sorex araneus	87.27	0.00e+00	1086.00
IUUC-Sbi-113925	Sorghum bicolor	32.70	2.00e-20	93.60
IUUC-Sre-114917	Sporisorium reilianum	34.94	4.00e-06	45.80
IUUC-Ssc-115712	Sus scrofa	91.24	0.00e+00	1325.00
IUUC-Tgu-117148	Taeniopygia guttata	75.51	0.00e+00	1033.00
IUUC-Tru-117831	Takifugu rubripes	47.81	1.00e-164	573.00
IUUC-Tsy-118917	Tarsius syrichta	88.63	0.00e+00	1092.00
IUUC-Tni-120783	Tetraodon nigroviridis	47.81	1.00e-158	553.00
IUUC-Tca-121430	Theobroma cacao	39.20	4.00e-09	55.80
IUUC-Tae-123752	Triticum aestivum	35.71	5.00e-18	85.10
IUUC-Tur-126238	Triticum urartu	33.33	5.00e-17	81.60
IUUC-Tbe-127989	Tupaia belangeri	34.55	8.00e-04	39.70
IUUC-Ttr-128615	Tursiops truncatus	84.31	0.00e+00	1059.00
IUUC-Vpa-130531	Vicugna pacos	91.24	0.00e+00	1176.00
IUUC-Vvi-131607	Vitis vinifera	39.07	3.00e-18	85.90
IUUC-Xtr-132787	Xenopus tropicalis	59.39	0.00e+00	756.00
IUUC-Xma-133815	Xiphophorus maculatus	48.56	3.00e-167	581.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence