iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121336

Ensembl Protein ID

EOY15815

UniProt Accession

A0A061FER6; A0A061FER6_THECC

Genbank Protein ID

EOY15815.1

Protein Name

F-box family protein

Genbank Nucleotide ID

CM001886

Gene Name

TCM_034776

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_034776	EOY15815	EOY15815

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	64.81	4.00e-55	210.00	IUUC-Ath-007482

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MKRSAPDSQV PGADQKMKKL KEEAEEGRGL MNLDENLLYE VLKHVDARTL AMASCVSRLW 60
HQTAKDERLW ELICTRHWAN IGCGTQQLRS VVLPLGGFRR LHSLYLWPLS KPQAASASSW 120

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Nucleotide Sequence
(Fasta)

ATCAAAACCA GCTCCCATTA CCCTCACCCA CCCCCATCCC CCTCGTTATT TCCCATTCTC 60
AAAATCAACC TAAACGAGAG ATAAAACGGA AATCACCCAA AATCAAGGCT TCAGCTTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box

SMART

SM00256--FBOX

Gene Ontology

GO:0005634--C:nucleus
GO:0019005--C:SCF ubiquitin ligase complex
GO:0010162--P:seed dormancy process
GO:0009845--P:seed germination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002597	Amborella trichopoda	62.41	5.00e-39	153.00
IUUC-Aly-006435	Arabidopsis lyrata	64.24	6.00e-55	205.00
IUUC-Ath-007482	Arabidopsis thaliana	64.81	2.00e-56	210.00
IUUC-Bdi-014906	Brachypodium distachyon	45.93	2.00e-30	124.00
IUUC-Bol-016273	Brassica oleracea	63.58	3.00e-48	182.00
IUUC-Bra-016627	Brassica rapa	63.58	7.00e-49	184.00
IUUC-Cel-018450	Caenorhabditis elegans	27.91	1.30e+00	26.20
IUUC-Ete-032914	Echinops telfairi	34.33	2.00e-03	34.70
IUUC-Gma-043301	Glycine max	62.21	2.00e-53	200.00
IUUC-Hsa-046251	Homo sapiens	32.32	2.00e-05	41.20
IUUC-Hvu-047070	Hordeum vulgare	48.78	2.00e-24	104.00
IUUC-Lpe-050816	Leersia perrieri	44.68	7.10e-01	26.20
IUUC-Mtr-057791	Medicago truncatula	65.71	6.00e-59	218.00
IUUC-Mga-060054	Meleagris gallopavo	35.29	1.40e-02	33.10
IUUC-Mac-064781	Musa acuminata	58.46	2.00e-33	134.00
IUUC-Opr-070849	Ochotona princeps	32.32	3.00e-05	41.60
IUUC-Oan-072882	Ornithorhynchus anatinus	33.33	4.00e-06	43.50
IUUC-Obr-076578	Oryza brachyantha	49.60	5.00e-32	130.00
IUUC-Ogl-077389	Oryza glaberrima	46.77	1.00e-21	95.50
IUUC-Oin-079212	Oryza indica	46.77	1.00e-21	95.50
IUUC-Pma-094686	Petromyzon marinus	28.57	5.00e-03	33.10
IUUC-Pop-098990	Populus trichocarpa	67.31	1.00e-60	224.00
IUUC-Ppe-102068	Prunus persica	63.38	1.00e-49	187.00
IUUC-Smo-108701	Selaginella moellendorffii	45.60	2.00e-22	97.40
IUUC-Sit-110635	Setaria italica	48.48	1.00e-22	99.00
IUUC-Sly-111686	Solanum lycopersicum	55.69	4.00e-26	110.00
IUUC-Stu-111934	Solanum tuberosum	56.60	1.00e-28	119.00
IUUC-Sbi-113872	Sorghum bicolor	58.67	1.00e-17	82.40
IUUC-Tae-124891	Triticum aestivum	39.62	2.00e-07	48.10
IUUC-Vvi-131285	Vitis vinifera	61.62	2.00e-52	197.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence