iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.80e-10	40.0	502	540
ULD/UDP/UBQ/UBQ_PIM	1.20e-19	70.1	9	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGF.dreealqaLraannnleaAveyLld 40
           ++++leql +MGF +r+++lqaL a++++++aAve+Ll+
   Q: 502  YQSQLEQLNAMGFvNRDANLQALIATFGDINAAVERLLS 540
           689**********************************96 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkks 74
           +++ vkt+k+k+ ++ev+ed+ ++++K ++a+++  +peq+ LI+aGki+kD +tL+ ++ikd+ +vhlv+k +
   Q: 9    INVVVKTPKDKK-TVEVDEDSGIKDFKILVAQKFEAEPEQLVLIFAGKIMKDTDTLQMHNIKDNLTVHLVIKAP 81
           5789********.**********************************************************976 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MAEGGSKRIN VVVKTPKDKK TVEVDEDSGI KDFKILVAQK FEAEPEQLVL IFAGKIMKDT 60
DTLQMHNIKD NLTVHLVIKA PTRNNEQPAR QPADVRQTPF GLNQFGGLAG MEALGAGSNT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATCGTGAGT GTGTGTGTGT CCGTGTGAGT GAGAAAGTGA CGAATTACTT TTCATCAAAT 60
GGGAAATAAT TTAGGGTGAA AACACGTATA TATTCGGAAC ACATTTAAAT TACAGACGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR002004--PABP_HYD
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR015496--Ubiquilin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0070628--F:proteasome binding
GO:0042982--P:amyloid precursor protein metabolic process

KEGG

dme:Dmel_CG14224

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000864	Aegilops tauschii	46.48	9.00e-34	137.00
IUUC-Aml-001461	Ailuropoda melanoleuca	48.28	2.00e-105	375.00
IUUC-Atr-002470	Amborella trichopoda	38.19	7.00e-41	160.00
IUUC-Apl-003241	Anas platyrhynchos	47.95	8.00e-104	370.00
IUUC-Aca-004511	Anolis carolinensis	45.83	7.00e-119	420.00
IUUC-Aly-005419	Arabidopsis lyrata	36.02	1.00e-51	196.00
IUUC-Ath-007271	Arabidopsis thaliana	34.07	2.00e-50	192.00
IUUC-Acl-008361	Aspergillus clavatus	23.35	5.00e-07	48.10
IUUC-Afl-008403	Aspergillus flavus	23.89	1.00e-08	53.50
IUUC-Afu-009029	Aspergillus fumigatus	23.53	1.00e-07	50.40
IUUC-Ang-009826	Aspergillus niger	24.56	3.00e-10	58.50
IUUC-Aor-010091	Aspergillus oryzae	23.89	1.00e-08	53.50
IUUC-Ame-011329	Astyanax mexicanus	48.37	1.00e-112	399.00
IUUC-Bgr-012188	Blumeria graminis	26.70	5.00e-12	64.70
IUUC-Bta-013048	Bos taurus	45.89	3.00e-120	424.00
IUUC-Bci-013628	Botrytis cinerea	26.15	1.00e-07	50.10
IUUC-Bdi-014506	Brachypodium distachyon	32.83	2.00e-48	186.00
IUUC-Bol-015452	Brassica oleracea	36.57	1.00e-42	167.00
IUUC-Bra-017101	Brassica rapa	34.54	3.00e-54	205.00
IUUC-Cel-018631	Caenorhabditis elegans	36.82	5.00e-71	260.00
IUUC-Cja-019976	Callithrix jacchus	46.62	5.00e-124	437.00
IUUC-Cfa-020092	Canis familiaris	46.96	3.00e-123	434.00
IUUC-Cpo-022388	Cavia porcellus	46.92	2.00e-122	432.00
IUUC-Cre-022634	Chlamydomonas reinhardtii	50.91	2.00e-11	62.80
IUUC-Csa-024087	Chlorocebus sabaeus	46.98	4.00e-125	440.00
IUUC-Cho-024834	Choloepus hoffmanni	47.59	3.00e-126	444.00
IUUC-Cin-025136	Ciona intestinalis	48.63	1.00e-83	302.00
IUUC-Csv-026009	Ciona savignyi	45.90	1.00e-84	306.00
IUUC-Cgl-026590	Colletotrichum gloeosporioides	28.04	8.00e-10	57.40
IUUC-Cne-026833	Cryptococcus neoformans	27.94	5.00e-18	84.30
IUUC-Cme-027155	Cyanidioschyzon merolae	48.04	6.00e-28	118.00
IUUC-Dre-028009	Danio rerio	46.68	1.00e-107	382.00
IUUC-Dno-029892	Dasypus novemcinctus	50.00	1.00e-66	246.00
IUUC-Dor-030519	Dipodomys ordii	47.06	4.00e-121	427.00
IUUC-Dse-031421	Dothistroma septosporum	28.25	6.00e-13	67.80
IUUC-Ete-032273	Echinops telfairi	47.37	1.00e-121	429.00
IUUC-Eca-033667	Equus caballus	47.14	2.00e-121	428.00
IUUC-Eeu-034865	Erinaceus europaeus	41.90	4.00e-62	231.00
IUUC-Fca-036179	Felis catus	44.46	9.00e-115	406.00
IUUC-Fal-037642	Ficedula albicollis	46.82	2.00e-122	431.00
IUUC-Fox-037726	Fusarium oxysporum	28.77	7.00e-11	60.80
IUUC-Fso-038204	Fusarium solani	26.91	3.00e-08	52.40
IUUC-Gmo-039317	Gadus morhua	49.02	1.00e-110	393.00
IUUC-Ggr-039961	Gaeumannomyces graminis	25.70	2.00e-09	55.80
IUUC-Gga-041264	Gallus gallus	46.38	1.00e-127	449.00
IUUC-Gac-041826	Gasterosteus aculeatus	49.12	2.00e-107	382.00
IUUC-Gma-042681	Glycine max	32.78	6.00e-31	128.00
IUUC-Ggo-044969	Gorilla gorilla	46.98	1.00e-119	422.00
IUUC-Hsa-046669	Homo sapiens	46.98	4.00e-125	441.00
IUUC-Hvu-047094	Hordeum vulgare	55.81	1.00e-08	50.80
IUUC-Itr-048337	Ictidomys tridecemlineatus	51.83	1.00e-91	329.00
IUUC-Lch-050192	Latimeria chalumnae	50.49	9.00e-105	373.00
IUUC-Lpe-051401	Leersia perrieri	32.85	1.00e-32	133.00
IUUC-Loc-052846	Lepisosteus oculatus	52.88	4.00e-87	314.00
IUUC-Lma-053152	Leptosphaeria maculans	27.69	2.00e-14	72.80
IUUC-Laf-054278	Loxodonta africana	47.14	2.00e-117	415.00
IUUC-Mcc-055680	Macaca mulatta	46.98	4.00e-125	441.00
IUUC-Meu-056207	Macropus eugenii	42.34	4.00e-91	327.00
IUUC-Mor-057194	Magnaporthe oryzae	38.46	7.00e-09	54.30
IUUC-Mpo-057467	Magnaporthe poae	45.45	2.00e-06	43.50
IUUC-Mtr-057772	Medicago truncatula	33.44	1.00e-37	150.00
IUUC-Mla-058987	Melampsora laricipopulina	44.19	1.00e-05	43.50
IUUC-Mga-059894	Meleagris gallopavo	48.31	2.00e-102	365.00
IUUC-Mvi-060466	Microbotryum violaceum	50.00	5.00e-07	48.10
IUUC-Mmr-061094	Microcebus murinus	46.98	7.00e-125	440.00
IUUC-Mdo-062728	Monodelphis domestica	47.85	5.00e-106	377.00
IUUC-Mmu-064088	Mus musculus	45.31	2.00e-122	431.00
IUUC-Mac-064528	Musa acuminata	31.83	7.00e-46	177.00
IUUC-Mpu-066282	Mustela putorius furo	48.52	1.00e-107	382.00
IUUC-Mlu-068158	Myotis lucifugus	47.05	1.00e-121	429.00
IUUC-Nfi-068487	Neosartorya fischeri	23.64	9.00e-08	50.80
IUUC-Ncr-068732	Neurospora crassa	26.85	2.00e-09	56.20
IUUC-Nle-069321	Nomascus leucogenys	46.98	4.00e-125	441.00
IUUC-Opr-071098	Ochotona princeps	52.47	4.00e-92	331.00
IUUC-Ont-072038	Oreochromis niloticus	54.17	3.00e-86	311.00
IUUC-Oan-072808	Ornithorhynchus anatinus	47.41	7.00e-119	419.00
IUUC-Ocu-074301	Oryctolagus cuniculus	46.01	8.00e-123	433.00
IUUC-Oba-075114	Oryza barthii	37.96	2.00e-35	143.00
IUUC-Obr-076444	Oryza brachyantha	46.90	1.00e-26	114.00
IUUC-Ogl-077147	Oryza glaberrima	37.96	2.00e-35	143.00
IUUC-Ogu-078322	Oryza glumaepatula	36.26	2.00e-35	143.00
IUUC-Oin-080117	Oryza indica	36.26	1.00e-35	143.00
IUUC-Olo-080565	Oryza longistaminata	34.06	4.00e-38	151.00
IUUC-Ome-081155	Oryza meridionalis	36.63	3.00e-33	135.00
IUUC-Oni-082060	Oryza nivara	36.26	1.00e-35	143.00
IUUC-Opu-083241	Oryza punctata	33.26	2.00e-48	186.00
IUUC-Oru-084808	Oryza rufipogon	36.26	1.00e-35	143.00
IUUC-Osa-085932	Oryza sativa	36.26	1.00e-35	143.00
IUUC-Ola-086802	Oryzias latipes	48.69	4.00e-103	367.00
IUUC-Olu-087597	Ostreococcus lucimarinus	34.44	4.00e-24	104.00
IUUC-Oga-088495	Otolemur garnettii	48.98	6.00e-109	387.00
IUUC-Oar-089711	Ovis aries	47.28	2.00e-119	421.00
IUUC-Ptr-091439	Pan troglodytes	46.98	3.00e-123	434.00
IUUC-Pan-092641	Papio anubis	46.98	4.00e-125	441.00
IUUC-Psi-093518	Pelodiscus sinensis	46.68	7.00e-115	406.00
IUUC-Pma-094727	Petromyzon marinus	32.49	4.00e-35	142.00
IUUC-Pno-094908	Phaeosphaeria nodorum	30.10	4.00e-10	57.40
IUUC-Ppa-095193	Physcomitrella patens	48.06	3.00e-32	132.00
IUUC-Pfo-096638	Poecilia formosa	50.22	1.00e-108	385.00
IUUC-Pab-098699	Pongo abelii	49.07	2.00e-127	448.00
IUUC-Pop-099549	Populus trichocarpa	33.04	7.00e-46	177.00
IUUC-Pca-100194	Procavia capensis	46.30	8.00e-39	154.00
IUUC-Ppe-101590	Prunus persica	39.71	1.00e-46	180.00
IUUC-Pva-102513	Pteropus vampyrus	52.55	2.00e-70	259.00
IUUC-Pgr-103261	Puccinia graminis	29.67	1.00e-08	53.10
IUUC-Ptt-103817	Puccinia triticina	30.00	3.00e-09	55.10
IUUC-Pte-104090	Pyrenophora teres	27.40	2.00e-07	49.70
IUUC-Pyt-104472	Pyrenophora triticirepentis	27.18	4.00e-06	45.10
IUUC-Rno-104908	Rattus norvegicus	46.06	1.00e-127	449.00
IUUC-Sce-106332	Saccharomyces cerevisiae	27.19	4.00e-14	71.20
IUUC-Sha-106881	Sarcophilus harrisii	46.98	6.00e-102	363.00
IUUC-Spo-108223	Schizosaccharomyces pombe	28.50	2.00e-13	69.30
IUUC-Ssl-108425	Sclerotinia sclerotiorum	48.84	1.00e-06	46.20
IUUC-Smo-108910	Selaginella moellendorffii	32.89	3.00e-34	138.00
IUUC-Sit-110766	Setaria italica	36.51	8.00e-34	137.00
IUUC-Sly-111240	Solanum lycopersicum	55.05	6.00e-31	127.00
IUUC-Stu-112263	Solanum tuberosum	36.57	2.00e-41	163.00
IUUC-Sar-113648	Sorex araneus	45.18	4.00e-88	317.00
IUUC-Sbi-114273	Sorghum bicolor	46.56	2.00e-32	132.00
IUUC-Ssc-115820	Sus scrofa	46.61	2.00e-123	435.00
IUUC-Tgu-116845	Taeniopygia guttata	46.44	2.00e-97	348.00
IUUC-Tru-118652	Takifugu rubripes	50.30	1.00e-82	300.00
IUUC-Tsy-119596	Tarsius syrichta	53.28	3.00e-59	222.00
IUUC-Tni-119780	Tetraodon nigroviridis	44.35	3.00e-122	431.00
IUUC-Tca-121558	Theobroma cacao	31.51	4.00e-45	175.00
IUUC-Tre-122085	Trichoderma reesei	27.45	2.00e-08	52.40
IUUC-Tvi-122381	Trichoderma virens	28.50	3.00e-12	65.50
IUUC-Tae-125801	Triticum aestivum	46.48	6.00e-34	137.00
IUUC-Tur-126783	Triticum urartu	34.29	5.00e-38	151.00
IUUC-Tme-127116	Tuber melanosporum	26.82	4.00e-10	58.50
IUUC-Tbe-127379	Tupaia belangeri	45.73	1.00e-92	332.00
IUUC-Ttr-128630	Tursiops truncatus	45.00	1.00e-120	426.00
IUUC-Uma-129639	Ustilago maydis	22.91	2.00e-08	52.80
IUUC-Vda-129991	Verticillium dahliae	28.50	2.00e-10	59.70
IUUC-Vpa-130413	Vicugna pacos	42.94	2.00e-67	249.00
IUUC-Vvi-131599	Vitis vinifera	36.08	3.00e-38	152.00
IUUC-Xtr-132595	Xenopus tropicalis	51.06	9.00e-102	363.00
IUUC-Xma-134155	Xiphophorus maculatus	48.02	6.00e-110	390.00
IUUC-Yli-134630	Yarrowia lipolytica	25.99	1.00e-10	59.70
IUUC-Zma-135661	Zea mays	30.73	4.00e-39	155.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence