iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099468

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_830264; POPTR_0002s11110g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s11110	POPTR_0002s11110.1	POPTR_0002s11110.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/HECT	3.00e-120	402.8	3294	3631
UBD/Alpha-Helix/UBA	1.40e-08	35.7	1270	1309

Active Site

Position(s)	Description	Evidence
3599	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00104}

Domain Profile

E3 activity/HECT

   S: 4    dlkkrlevefvgEegldlgGvtreflallskelqnpdlglflysendketlqpnpdsglknpehlklFeflGrllgkalqdgrlldlpl 92
           dlk rl v+f+gEeg+d+gG+tre+++lls+ ++++ + lf+ + ++++t+qpnp+s ++ +ehl++F+f+Gr++gkal+dg+lld+++
   Q: 3294 DLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFT-TVGNESTFQPNPNSVYQ-TEHLSYFKFVGRVVGKALFDGQLLDVHF 3380
           899**********************************99995.55577788******986.5*************************** PP
   S: 93   sksfyklllgkklsledleevdpelykslkeikenaesdieelgldltfsvseei.......lgetkeeeLkpgGenipVtneNkeeYv 174
           ++sfyk++lg+k++++d+e++dp+++k+lk+++en   di++  ldltfs++ ++        +e++++eL+pgG+ni+Vt+eNk++Yv
   Q: 3381 TRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLEN---DISDV-LDLTFSIDADEeklilyeKNEVTDYELIPGGRNIKVTEENKHQYV 3465
           *********************************99...99998.99999977777779997778888999******************* PP
   S: 175  klvveyrlkegikeqveafreGfneviplellslFteeelellicGeeeidvedlkketkykggytedspaiqwFwevleefsseerka 263
           +lv+e+rl++ i+ q++af eGf+e+i+ el+s+F+ +elelli+G ++id++d++ +t+y +gy++ sp+iqwFwev+++fs+e++++
   Q: 3466 DLVAEHRLTTAIRPQINAFLEGFTELISRELISIFNDKELELLISGLPDIDLDDMRTNTEY-SGYSPASPVIQWFWEVVQGFSKEDKAR 3553
           *************************************************************.55************************* PP
   S: 264  fLqFvTgssrlPlgGfaelk....prlfvirk.dasddrlPssnTCfnyLkLPeYsskeilkekLlyAieet.kgFel 335
           +LqFvTg+s++Pl+Gf +l+     ++f+i+k ++s+d+lPs++TCfn+L+LPeY+sk+ l+e+Ll+Ai+e+ +gF++
   Q: 3554 LLQFVTGTSKVPLEGFSALQgisgSQKFQIHKaYGSPDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEAsEGFGF 3631
           ************************9*******999*************************************9***85 PP

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraa.nnnleaAveyLldg 41
           +e  +  +veMGF+r++a +aLr+  +n++e A+++L+++
   Q: 1270 NETTISTIVEMGFSRSRAEEALRQVgSNSVELAMDWLFSH 1309
           678899********************************97 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MWCCVVCTDL FFKKSDHGFC LQPPKIKAFV DKVIQSPLQD IAIPLSGFRW EYSKGNFHHW 60
RPLFLHFDTY FKTYLSSRNG LSLSDNISED DSPFPKHAVL QILRVMQIIL ENCHDKSSFD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGGTGTT GCGTAGTTTG CACTGATTTG TTTTTCAAAA AGTCTGACCA TGGTTTTTGT 60
TTGCAGCCTC CTAAAATTAA AGCATTTGTT GACAAGGTGA TCCAGAGTCC ATTGCAAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase
KW-0833--Ubl conjugation pathway

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR025527--DUF4414
IPR010309--E3_Ub_ligase_DUF908
IPR010314--E3_Ub_ligase_DUF913
IPR000569--HECT_dom
IPR015940--UBA
IPR009060--UBA-like
IPR003903--UIM_dom

PROSITE

PS50237--HECT
PS50030--UBA
PS50330--UIM

Pfam

PF14377--DUF4414
PF06012--DUF908
PF06025--DUF913
PF00632--HECT
PF00627--UBA

SMART

SM00119--HECTc
SM00165--UBA

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0002s11110g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000627	Aegilops tauschii	60.14	0.00e+00	3818.00
IUUC-Atr-002582	Amborella trichopoda	64.05	0.00e+00	4090.00
IUUC-Apl-003400	Anas platyrhynchos	43.86	2.00e-99	355.00
IUUC-Aly-006157	Arabidopsis lyrata	69.43	0.00e+00	4531.00
IUUC-Ago-008005	Ashbya gossypii	39.88	6.00e-134	473.00
IUUC-Acl-008254	Aspergillus clavatus	40.38	7.00e-139	489.00
IUUC-Afl-008712	Aspergillus flavus	40.19	3.00e-140	492.00
IUUC-Afu-009022	Aspergillus fumigatus	40.59	2.00e-140	495.00
IUUC-Ang-009771	Aspergillus niger	40.56	1.00e-139	492.00
IUUC-Aor-010186	Aspergillus oryzae	39.45	2.00e-130	460.00
IUUC-Ate-010253	Aspergillus terreus	32.88	3.00e-152	534.00
IUUC-Bgr-012043	Blumeria graminis	32.59	3.00e-149	524.00
IUUC-Bci-013995	Botrytis cinerea	38.98	6.00e-139	490.00
IUUC-Bdi-014884	Brachypodium distachyon	61.95	0.00e+00	3940.00
IUUC-Bol-015228	Brassica oleracea	67.37	0.00e+00	2298.00
IUUC-Bra-016726	Brassica rapa	66.70	0.00e+00	2410.00
IUUC-Cpo-021766	Cavia porcellus	44.55	3.00e-102	365.00
IUUC-Cin-025627	Ciona intestinalis	49.65	5.00e-121	430.00
IUUC-Cgl-026647	Colletotrichum gloeosporioides	38.09	3.00e-138	488.00
IUUC-Cne-027095	Cryptococcus neoformans	32.80	3.00e-111	397.00
IUUC-Cme-027267	Cyanidioschyzon merolae	52.18	2.00e-128	453.00
IUUC-Dse-031197	Dothistroma septosporum	40.09	9.00e-140	493.00
IUUC-Ete-032966	Echinops telfairi	44.32	3.00e-102	366.00
IUUC-Fal-036687	Ficedula albicollis	43.86	4.00e-100	358.00
IUUC-Fox-037756	Fusarium oxysporum	32.87	6.00e-161	563.00
IUUC-Fso-038464	Fusarium solani	32.26	5.00e-152	533.00
IUUC-Ggr-039946	Gaeumannomyces graminis	41.60	5.00e-135	476.00
IUUC-Gga-040845	Gallus gallus	43.86	3.00e-100	359.00
IUUC-Gma-042956	Glycine max	72.37	0.00e+00	4959.00
IUUC-Ggo-044465	Gorilla gorilla	44.22	2.00e-100	360.00
IUUC-Hvu-047697	Hordeum vulgare	61.57	0.00e+00	3902.00
IUUC-Kpa-049228	Komagataella pastoris	39.67	8.00e-131	462.00
IUUC-Lpe-051550	Leersia perrieri	61.84	0.00e+00	3898.00
IUUC-Lma-053159	Leptosphaeria maculans	33.17	8.00e-150	526.00
IUUC-Meu-056751	Macropus eugenii	45.15	1.00e-78	288.00
IUUC-Mor-057201	Magnaporthe oryzae	32.18	4.00e-145	510.00
IUUC-Mpo-057597	Magnaporthe poae	41.43	1.00e-134	475.00
IUUC-Mtr-057633	Medicago truncatula	72.28	0.00e+00	4869.00
IUUC-Mga-059935	Meleagris gallopavo	43.86	4.00e-100	358.00
IUUC-Mac-065499	Musa acuminata	63.80	0.00e+00	4006.00
IUUC-Opr-071044	Ochotona princeps	45.92	8.00e-93	334.00
IUUC-Oba-075757	Oryza barthii	61.65	0.00e+00	3895.00
IUUC-Obr-076553	Oryza brachyantha	62.18	0.00e+00	3929.00
IUUC-Ogl-077520	Oryza glaberrima	61.93	0.00e+00	3976.00
IUUC-Ogu-078278	Oryza glumaepatula	60.14	0.00e+00	2254.00
IUUC-Oin-079767	Oryza indica	61.74	0.00e+00	3954.00
IUUC-Olo-080380	Oryza longistaminata	60.66	0.00e+00	3902.00
IUUC-Ome-081925	Oryza meridionalis	61.86	0.00e+00	3969.00
IUUC-Oni-082619	Oryza nivara	62.14	0.00e+00	3977.00
IUUC-Opu-083684	Oryza punctata	60.55	0.00e+00	3869.00
IUUC-Oru-084501	Oryza rufipogon	62.01	0.00e+00	3985.00
IUUC-Osa-086251	Oryza sativa	72.74	0.00e+00	1161.00
IUUC-Ola-086777	Oryzias latipes	44.55	2.00e-102	366.00
IUUC-Ptr-090529	Pan troglodytes	44.32	4.00e-102	365.00
IUUC-Psi-093969	Pelodiscus sinensis	44.09	2.00e-101	362.00
IUUC-Pma-094364	Petromyzon marinus	45.66	4.00e-87	314.00
IUUC-Pno-094871	Phaeosphaeria nodorum	39.79	4.00e-138	487.00
IUUC-Pca-100568	Procavia capensis	44.39	2.00e-86	313.00
IUUC-Ppe-101641	Prunus persica	77.17	0.00e+00	5191.00
IUUC-Pte-104018	Pyrenophora teres	32.38	1.00e-146	515.00
IUUC-Pyt-104713	Pyrenophora triticirepentis	32.52	2.00e-143	505.00
IUUC-Rno-105153	Rattus norvegicus	44.32	3.00e-102	365.00
IUUC-Sce-106449	Saccharomyces cerevisiae	42.76	1.00e-126	449.00
IUUC-Sja-107814	Schizosaccharomyces japonicus	38.77	5.00e-134	473.00
IUUC-Sit-110598	Setaria italica	59.46	0.00e+00	2197.00
IUUC-Sly-111706	Solanum lycopersicum	68.01	0.00e+00	4533.00
IUUC-Sbi-114042	Sorghum bicolor	58.96	0.00e+00	2166.00
IUUC-Sre-114958	Sporisorium reilianum	50.69	2.00e-142	499.00
IUUC-Tgu-117225	Taeniopygia guttata	43.64	5.00e-100	358.00
IUUC-Tsy-119407	Tarsius syrichta	48.12	5.00e-96	345.00
IUUC-Tca-121479	Theobroma cacao	79.97	0.00e+00	5369.00
IUUC-Tre-121909	Trichoderma reesei	32.45	2.00e-152	534.00
IUUC-Tvi-122370	Trichoderma virens	32.19	2.00e-149	525.00
IUUC-Tae-125214	Triticum aestivum	60.85	0.00e+00	2080.00
IUUC-Tme-127172	Tuber melanosporum	39.64	2.00e-138	488.00
IUUC-Tbe-127762	Tupaia belangeri	42.30	4.00e-84	306.00
IUUC-Uma-129355	Ustilago maydis	46.09	3.00e-145	508.00
IUUC-Vda-129886	Verticillium dahliae	39.33	1.00e-136	482.00
IUUC-Vvi-131078	Vitis vinifera	76.80	0.00e+00	5162.00
IUUC-Yli-134657	Yarrowia lipolytica	37.79	2.00e-133	471.00
IUUC-Zma-135581	Zea mays	58.56	0.00e+00	2160.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence