iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076784

Ensembl Protein ID

OB12G23180.1

UniProt Accession

J3NEB0; J3NEB0_ORYBR

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB12G23180	OB12G23180.1	OB12G23180.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.70e-35	119.9	154	226

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+ef+CpIslelM+dPv++++G+ty+r++Iekw+asg++tcP+t+q+++ + l+Pn++lr+li +wce+n++
   Q: 154  IPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQRMSTSALTPNYVLRSLIAQWCESNGI 226
           8*********************************************************************987 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MKKFQGVILQ LEQALCDIPY NQLDISDEVR EQVELVHAQL KRAKERIDMP DDEFYNDLLS 60
LYNKNYDPSA ELAILGRLSE KLHLMTITDL TQESLALHEM VASGGGQDPG EHIEKMSMLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTCTTGAGA GGGACAGTGT AATGAAAAAG TTTCAGGGAG TAATTTTGCA GTTGGAACAA 60
GCTTTGTGCG ACATCCCGTA CAATCAATTG GATATATCAG ATGAAGTTAG AGAGCAGGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR008709--Neurochondrin
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF05536--Neurochondrin
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

obr:102701961

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000439	Aegilops tauschii	86.36	0.00e+00	971.00
IUUC-Bdi-014829	Brachypodium distachyon	86.19	0.00e+00	973.00
IUUC-Hvu-047396	Hordeum vulgare	85.25	0.00e+00	827.00
IUUC-Lpe-051065	Leersia perrieri	94.21	0.00e+00	1049.00
IUUC-Oba-075101	Oryza barthii	95.26	0.00e+00	1054.00
IUUC-Ogl-077638	Oryza glaberrima	95.26	0.00e+00	1055.00
IUUC-Ogu-078222	Oryza glumaepatula	95.26	0.00e+00	1055.00
IUUC-Oin-079280	Oryza indica	96.61	0.00e+00	1061.00
IUUC-Olo-080852	Oryza longistaminata	94.56	0.00e+00	1051.00
IUUC-Ome-081164	Oryza meridionalis	94.74	0.00e+00	1049.00
IUUC-Oni-083018	Oryza nivara	96.61	0.00e+00	1060.00
IUUC-Opu-083626	Oryza punctata	95.61	0.00e+00	1056.00
IUUC-Oru-084907	Oryza rufipogon	95.09	0.00e+00	1053.00
IUUC-Osa-085313	Oryza sativa	94.73	0.00e+00	931.00
IUUC-Ppe-102057	Prunus persica	68.89	0.00e+00	724.00
IUUC-Sit-110392	Setaria italica	89.63	0.00e+00	999.00
IUUC-Tae-123841	Triticum aestivum	81.82	0.00e+00	909.00
IUUC-Tur-126448	Triticum urartu	86.01	0.00e+00	967.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence