iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049262

Ensembl Protein ID

CAY70196

UniProt Accession

C4R3U9; C4R3U9_KOMPG

Genbank Protein ID

CAY70196.1

Protein Name

Protein involved in pre-rRNA processing

Genbank Nucleotide ID

FN392321

Gene Name

PAS_chr3_0207

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr3_0207	CAY70196	CAY70196

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-13	48.7	429	456

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtcla.f..sdtllvsGsdDgtikvWDl 30
           +vt+++ +  s + + +Gs++gti+vW +
   Q: 429  WVTAIHsLplS-DVFFTGSWNGTIRVWKI 456
           88888756755.789************95 PP

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MAKDPFLSDG SRKRKRTNPP TSNVNRISKT QNKNQTERAD EDITSESETE NLSSDGEVKE 60
EQSSESEDEE DFAETAADKR RRLAKQYLEN LQAEQESYEF DAQDLDNDIL ARRLQMDVNE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAAAAG ATCCGTTTTT ATCGGATGGT TCCCGTAAGC GTAAGAGAAC AAATCCCCCC 60
ACTTCCAATG TGAACAGGAT ATCAAAAACG CAAAACAAAA ACCAAACGGA AAGAGCTGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0031428--C:box C/D snoRNP complex
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding

KEGG

ppa:PAS_chr3_0207

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000586	Aegilops tauschii	22.73	3.00e-23	100.00
IUUC-Aml-002072	Ailuropoda melanoleuca	31.39	7.00e-52	195.00
IUUC-Atr-002824	Amborella trichopoda	28.00	2.00e-30	125.00
IUUC-Apl-003264	Anas platyrhynchos	34.35	5.00e-56	209.00
IUUC-Aca-004898	Anolis carolinensis	33.42	1.00e-59	221.00
IUUC-Aly-006383	Arabidopsis lyrata	25.29	1.00e-24	105.00
IUUC-Ath-007119	Arabidopsis thaliana	25.17	1.00e-34	138.00
IUUC-Ago-007710	Ashbya gossypii	49.61	1.00e-139	488.00
IUUC-Acl-008345	Aspergillus clavatus	36.00	1.00e-71	261.00
IUUC-Afl-008718	Aspergillus flavus	35.31	5.00e-72	263.00
IUUC-Afu-008966	Aspergillus fumigatus	31.19	1.00e-69	254.00
IUUC-Ani-009214	Aspergillus nidulans	35.75	4.00e-78	283.00
IUUC-Ang-009774	Aspergillus niger	37.12	5.00e-76	276.00
IUUC-Aor-009956	Aspergillus oryzae	35.31	5.00e-72	263.00
IUUC-Ate-010449	Aspergillus terreus	33.18	3.00e-69	254.00
IUUC-Ame-011860	Astyanax mexicanus	32.82	1.00e-62	231.00
IUUC-Bgr-012213	Blumeria graminis	36.06	1.00e-89	322.00
IUUC-Bta-012698	Bos taurus	32.13	1.00e-54	204.00
IUUC-Bci-013973	Botrytis cinerea	36.79	1.00e-83	301.00
IUUC-Bdi-014790	Brachypodium distachyon	26.58	7.00e-29	119.00
IUUC-Bol-016068	Brassica oleracea	26.65	1.00e-27	115.00
IUUC-Bra-016953	Brassica rapa	27.07	3.00e-29	120.00
IUUC-Cel-018616	Caenorhabditis elegans	30.00	4.00e-48	183.00
IUUC-Cja-019532	Callithrix jacchus	30.57	7.00e-55	206.00
IUUC-Cfa-020961	Canis familiaris	30.18	5.00e-50	189.00
IUUC-Cpo-021527	Cavia porcellus	31.29	2.00e-54	204.00
IUUC-Csa-023106	Chlorocebus sabaeus	30.82	3.00e-54	203.00
IUUC-Cin-025670	Ciona intestinalis	31.97	3.00e-55	206.00
IUUC-Csv-026172	Ciona savignyi	30.21	5.00e-50	189.00
IUUC-Cgl-026619	Colletotrichum gloeosporioides	35.47	9.00e-78	282.00
IUUC-Cne-027070	Cryptococcus neoformans	28.37	1.00e-47	182.00
IUUC-Cme-027125	Cyanidioschyzon merolae	21.07	3.00e-18	84.70
IUUC-Dre-027919	Danio rerio	33.93	3.00e-61	226.00
IUUC-Dno-029684	Dasypus novemcinctus	30.41	8.00e-43	165.00
IUUC-Dor-030363	Dipodomys ordii	32.77	3.00e-32	130.00
IUUC-Dse-031503	Dothistroma septosporum	40.34	6.00e-81	293.00
IUUC-Dme-031979	Drosophila melanogaster	27.64	5.00e-42	163.00
IUUC-Eca-033735	Equus caballus	31.40	4.00e-53	199.00
IUUC-Fca-036193	Felis catus	31.25	2.00e-54	204.00
IUUC-Fal-037058	Ficedula albicollis	34.01	8.00e-61	225.00
IUUC-Fox-038036	Fusarium oxysporum	35.91	1.00e-85	308.00
IUUC-Fso-038298	Fusarium solani	35.58	3.00e-81	293.00
IUUC-Gmo-038796	Gadus morhua	33.63	7.00e-50	189.00
IUUC-Ggr-040074	Gaeumannomyces graminis	38.18	1.00e-82	298.00
IUUC-Gga-040743	Gallus gallus	34.10	2.00e-50	190.00
IUUC-Gac-042583	Gasterosteus aculeatus	30.98	4.00e-63	233.00
IUUC-Gma-042662	Glycine max	28.94	3.00e-29	120.00
IUUC-Ggo-045543	Gorilla gorilla	31.06	7.00e-55	206.00
IUUC-Hsa-047017	Homo sapiens	31.06	5.00e-55	206.00
IUUC-Hvu-047173	Hordeum vulgare	27.22	8.00e-34	135.00
IUUC-Itr-048062	Ictidomys tridecemlineatus	30.92	1.00e-55	208.00
IUUC-Lch-050566	Latimeria chalumnae	30.25	9.00e-50	189.00
IUUC-Lpe-051651	Leersia perrieri	26.91	4.00e-33	134.00
IUUC-Loc-051997	Lepisosteus oculatus	31.87	5.00e-59	219.00
IUUC-Lma-053182	Leptosphaeria maculans	35.03	7.00e-81	292.00
IUUC-Laf-054105	Loxodonta africana	30.52	1.00e-52	198.00
IUUC-Mcc-055215	Macaca mulatta	30.82	3.00e-54	203.00
IUUC-Meu-055943	Macropus eugenii	29.61	2.00e-49	187.00
IUUC-Mor-057069	Magnaporthe oryzae	35.45	9.00e-78	282.00
IUUC-Mpo-057358	Magnaporthe poae	38.67	2.00e-79	288.00
IUUC-Mtr-058209	Medicago truncatula	28.34	1.00e-37	148.00
IUUC-Mla-059043	Melampsora laricipopulina	34.19	1.00e-48	185.00
IUUC-Mga-060024	Meleagris gallopavo	33.43	7.00e-54	201.00
IUUC-Mvi-060371	Microbotryum violaceum	31.50	2.00e-62	231.00
IUUC-Mmr-061403	Microcebus murinus	31.63	1.00e-56	211.00
IUUC-Mdo-063026	Monodelphis domestica	30.47	3.00e-53	200.00
IUUC-Mmu-063646	Mus musculus	31.84	2.00e-54	204.00
IUUC-Mac-064801	Musa acuminata	25.58	2.00e-34	137.00
IUUC-Mpu-065760	Mustela putorius furo	31.73	6.00e-54	202.00
IUUC-Mlu-067963	Myotis lucifugus	30.88	5.00e-54	202.00
IUUC-Nfi-068288	Neosartorya fischeri	33.87	2.00e-73	267.00
IUUC-Ncr-068679	Neurospora crassa	39.47	6.00e-81	293.00
IUUC-Nle-069766	Nomascus leucogenys	31.22	5.00e-53	199.00
IUUC-Opr-070906	Ochotona princeps	31.96	6.00e-54	202.00
IUUC-Ont-071661	Oreochromis niloticus	31.93	3.00e-61	226.00
IUUC-Oan-073465	Ornithorhynchus anatinus	25.40	1.00e-27	115.00
IUUC-Ocu-074263	Oryctolagus cuniculus	31.63	3.00e-54	203.00
IUUC-Oba-075607	Oryza barthii	27.18	1.00e-31	128.00
IUUC-Ogl-077387	Oryza glaberrima	27.75	2.00e-32	131.00
IUUC-Ogu-078323	Oryza glumaepatula	27.44	3.00e-32	130.00
IUUC-Oin-079977	Oryza indica	23.37	2.00e-21	94.70
IUUC-Olo-080857	Oryza longistaminata	27.18	9.00e-32	129.00
IUUC-Ome-081568	Oryza meridionalis	27.44	2.00e-31	127.00
IUUC-Oni-082685	Oryza nivara	27.13	6.00e-35	139.00
IUUC-Opu-084049	Oryza punctata	27.73	6.00e-32	129.00
IUUC-Oru-084348	Oryza rufipogon	27.13	7.00e-35	139.00
IUUC-Osa-086076	Oryza sativa	27.13	7.00e-35	139.00
IUUC-Ola-086991	Oryzias latipes	33.06	6.00e-60	222.00
IUUC-Olu-087891	Ostreococcus lucimarinus	28.20	7.00e-36	142.00
IUUC-Oga-088991	Otolemur garnettii	31.88	1.00e-54	205.00
IUUC-Oar-090430	Ovis aries	31.69	3.00e-54	203.00
IUUC-Ptr-091359	Pan troglodytes	30.82	1.00e-54	204.00
IUUC-Pan-092499	Papio anubis	30.82	5.00e-54	202.00
IUUC-Pma-094447	Petromyzon marinus	28.68	1.00e-43	168.00
IUUC-Pno-095008	Phaeosphaeria nodorum	33.53	1.00e-76	278.00
IUUC-Ppa-095680	Physcomitrella patens	26.49	4.00e-37	147.00
IUUC-Pfo-096430	Poecilia formosa	32.87	3.00e-63	233.00
IUUC-Pab-097649	Pongo abelii	30.91	1.00e-54	205.00
IUUC-Pop-100055	Populus trichocarpa	26.35	8.00e-40	155.00
IUUC-Pca-100317	Procavia capensis	34.48	5.00e-27	113.00
IUUC-Ppe-101999	Prunus persica	25.87	1.00e-36	145.00
IUUC-Pva-103046	Pteropus vampyrus	31.30	2.00e-55	207.00
IUUC-Pgr-103655	Puccinia graminis	33.83	4.00e-48	183.00
IUUC-Ptt-103812	Puccinia triticina	30.44	2.00e-47	181.00
IUUC-Pte-104243	Pyrenophora teres	32.52	4.00e-75	273.00
IUUC-Pyt-104512	Pyrenophora triticirepentis	32.68	3.00e-75	273.00
IUUC-Rno-104973	Rattus norvegicus	31.80	6.00e-55	206.00
IUUC-Sce-106329	Saccharomyces cerevisiae	48.63	5.00e-132	462.00
IUUC-Sha-106941	Sarcophilus harrisii	30.02	3.00e-52	197.00
IUUC-Sja-107821	Schizosaccharomyces japonicus	38.67	5.00e-82	296.00
IUUC-Spo-108329	Schizosaccharomyces pombe	34.01	1.00e-76	278.00
IUUC-Ssl-108552	Sclerotinia sclerotiorum	36.90	1.00e-83	301.00
IUUC-Smo-109198	Selaginella moellendorffii	23.54	3.00e-29	120.00
IUUC-Sit-109694	Setaria italica	26.82	1.00e-35	142.00
IUUC-Sly-111294	Solanum lycopersicum	27.12	7.00e-36	142.00
IUUC-Stu-112747	Solanum tuberosum	27.61	1.00e-36	145.00
IUUC-Sar-113315	Sorex araneus	30.88	1.00e-13	68.90
IUUC-Sbi-114694	Sorghum bicolor	27.35	2.00e-35	141.00
IUUC-Sre-114937	Sporisorium reilianum	29.23	3.00e-56	211.00
IUUC-Ssc-116127	Sus scrofa	31.53	5.00e-55	206.00
IUUC-Tgu-117242	Taeniopygia guttata	31.82	3.00e-37	146.00
IUUC-Tru-118285	Takifugu rubripes	32.95	5.00e-65	239.00
IUUC-Tni-120368	Tetraodon nigroviridis	31.59	2.00e-58	218.00
IUUC-Tca-121724	Theobroma cacao	24.31	3.00e-31	127.00
IUUC-Tre-122106	Trichoderma reesei	36.72	7.00e-88	315.00
IUUC-Tvi-122526	Trichoderma virens	36.33	5.00e-92	329.00
IUUC-Tae-122939	Triticum aestivum	27.76	8.00e-34	135.00
IUUC-Tur-126548	Triticum urartu	27.76	1.00e-33	135.00
IUUC-Tme-126985	Tuber melanosporum	38.70	9.00e-90	322.00
IUUC-Tbe-127923	Tupaia belangeri	31.64	1.00e-53	201.00
IUUC-Ttr-129308	Tursiops truncatus	30.52	6.00e-52	196.00
IUUC-Uma-129472	Ustilago maydis	31.75	2.00e-55	208.00
IUUC-Vda-129910	Verticillium dahliae	37.32	9.00e-84	302.00
IUUC-Vvi-131683	Vitis vinifera	26.39	7.00e-39	152.00
IUUC-Xtr-132118	Xenopus tropicalis	32.21	3.00e-59	220.00
IUUC-Xma-133804	Xiphophorus maculatus	33.14	5.00e-62	229.00
IUUC-Yli-134639	Yarrowia lipolytica	44.15	3.00e-119	419.00
IUUC-Zma-135884	Zea mays	27.45	6.00e-37	146.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence