iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014707

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000883

Gene Name

LOC100821454; BRADI_4g42620

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI4G42620	BRADI4G42620.1	BRADI4G42620.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.20e-07	31.9	112	154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl +++d   +++lp CgH fh  C+  w       +++ +CP+Cr
   Q: 112  CVVCLAEYEDKdlLRTLPyCGHNFHVACIDVW------LKQHTTCPVCR 154
           9*******6665588899**************......**********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MASGVSTSMV LTLLGFCVSV LFIVFVCSRL VCALVRRRRR RSRATPLPPG FPPLAANYFF 60
AVQVDRLGGA QPAPAGLDSA AVAAFPTRAY SSSAAGASTP SSSASSDAAP QCVVCLAEYE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTCGG GGGTGTCGAC GAGCATGGTG CTGACGCTGC TGGGCTTCTG CGTCAGCGTC 60
CTCTTCATCG TCTTCGTCTG CTCCAGGCTC GTCTGCGCGC TCGTGCGCCG CCGCCGCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100821454

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-044096	Glycine max	40.20	8.00e-38	149.00
IUUC-Hvu-047710	Hordeum vulgare	65.94	3.00e-45	174.00
IUUC-Lpe-050686	Leersia perrieri	63.67	4.00e-70	256.00
IUUC-Mac-065561	Musa acuminata	42.56	6.00e-38	149.00
IUUC-Oba-075916	Oryza barthii	64.37	1.00e-65	242.00
IUUC-Obr-076903	Oryza brachyantha	72.87	3.00e-54	203.00
IUUC-Ogl-077876	Oryza glaberrima	63.31	1.00e-65	241.00
IUUC-Ogu-078366	Oryza glumaepatula	61.86	2.00e-54	205.00
IUUC-Oin-079227	Oryza indica	54.81	2.00e-62	231.00
IUUC-Ome-081999	Oryza meridionalis	62.80	1.00e-65	241.00
IUUC-Oni-083053	Oryza nivara	61.86	1.00e-54	205.00
IUUC-Opu-083989	Oryza punctata	63.31	4.00e-71	260.00
IUUC-Oru-084285	Oryza rufipogon	61.86	2.00e-54	204.00
IUUC-Osa-086218	Oryza sativa	64.78	4.00e-66	243.00
IUUC-Pop-099967	Populus trichocarpa	37.45	1.00e-36	145.00
IUUC-Ppe-101855	Prunus persica	36.74	7.00e-34	135.00
IUUC-Sit-110660	Setaria italica	55.42	3.00e-44	171.00
IUUC-Sly-110875	Solanum lycopersicum	32.78	3.00e-33	134.00
IUUC-Sbi-113868	Sorghum bicolor	49.58	5.00e-36	143.00
IUUC-Tca-121445	Theobroma cacao	38.21	6.00e-37	146.00
IUUC-Tae-125846	Triticum aestivum	74.38	3.00e-69	253.00
IUUC-Tur-126013	Triticum urartu	75.56	4.00e-49	186.00
IUUC-Vvi-131455	Vitis vinifera	36.73	1.00e-34	138.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence