iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099516

Ensembl Protein ID

POPTR_0002s04580.1

UniProt Accession

B9GS70; B9GS70_POPTR

Genbank Protein ID

EEE81348.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_643213; POPTR_0002s04580g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s04580	POPTR_0002s04580.1	POPTR_0002s04580.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.20e-17	64.9	118	216

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlksDedldkavs 68
           ++vkvs++g+++++++dl+ + ++++L +a+ + +                         l+++++ ++YeD+dGD++ l++D+++d++v+
   Q: 118  TFVKVSMDGAPYLRKVDLKMYKTYQELSDALGKmFSsftigncgshglkdflnesklidLLNGTDYVPTYEDKDGDWM-LVGDVPWDMFVE 207
           68*******************************6225669999***************99999***************.************ PP
   S: 69   llaskksllrlliqk 83
                 s++rl+i+k
   Q: 208  ------SCKRLRIMK 216
           ......********8 PP

Organism

Populus trichocarpa

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MEVEKGTKMG FEETELRLGL PGNGGGAEGE MVRKRGFSET VDLKLKLSSK ESGADPNHEK 60
TSSLQREKNL LATDPAKPPA KAQVVGWPPV RSFRKNMLAV QKSSTDQECE KVPGGNATFV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCAAGCTAA CACACAACTG CGTGCCAATT ATAAGCTTAG AGAGAGAACA GAGAGAGTGG 60
GTTTTAGAGA GAGAGAAAGG GAGTGATCAG TTTCTGAGAG GAAACTAAGA GAGAGCGGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

pop:POPTR_0002s04580g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014859	Brachypodium distachyon	58.33	3.00e-75	274.00
IUUC-Gma-042804	Glycine max	70.40	4.00e-77	280.00
IUUC-Mtr-057817	Medicago truncatula	69.39	6.00e-77	279.00
IUUC-Olo-080519	Oryza longistaminata	59.06	3.00e-43	167.00
IUUC-Tca-121261	Theobroma cacao	82.46	2.00e-102	364.00
IUUC-Tae-123775	Triticum aestivum	77.44	7.00e-68	249.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence