iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggo-044639

Ensembl Protein ID

ENSGGOP00000004035.2

UniProt Accession

G3QNC2; G3QNC2_GORGO

Protein Name

Uncharacterized protein

Gene Name

UFD1L

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGGOG00000004104.2	ENSGGOT00000004132.2	ENSGGOP00000004035.2
ENSGGOG00000004104.2	ENSGGOT00000029783.1	ENSGGOP00000027853.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/Other	89.21	8.00e-172	600.00	IUUC-Hsa-046680
UBD/Other/Other	89.21	8.00e-172	600.00	IUUC-Hsa-046680

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Gorilla gorilla

Protein Sequence
(Fasta)

MFSFNMFDHP IPRVFQNRFS TQYRCFSVSM LAGPNDRSDV EKGGKIIMPP SALDQLSRLN 60
ITYPMLFKLT NKNSDRMTHC GVLEFVADEG ICYLPHWVSG AARVSRPYNL LVGQLGSTVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTCCGGTG AGCCTCTGGG GCGTACCGGC TTGGCGCGGC GGCAGCGGCA GCGGCGGCTG 60
GGAGAGCGGT CGGCGGGGTT TCTTCGTTGC ATTGCCTGAG AGGAGCGGAG TCTGCGAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004854--UFD1

Pfam

PF03152--UFD1

Gene Ontology

GO:0005634--C:nucleus
GO:0036501--C:UFD1-NPL4 complex
GO:0034098--C:VCP-NPL4-UFD1 AAA ATPase complex
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0039536--P:negative regulation of RIG-I signaling pathway
GO:0032480--P:negative regulation of type I interferon production
GO:0030970--P:retrograde protein transport, ER to cytosol
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000441	Aegilops tauschii	44.57	9.00e-61	226.00
IUUC-Aml-001398	Ailuropoda melanoleuca	89.18	2.00e-172	598.00
IUUC-Atr-002449	Amborella trichopoda	41.83	2.00e-50	192.00
IUUC-Apl-004065	Anas platyrhynchos	81.54	2.00e-137	480.00
IUUC-Aca-004973	Anolis carolinensis	83.09	3.00e-167	580.00
IUUC-Aly-005501	Arabidopsis lyrata	45.11	2.00e-61	229.00
IUUC-Ath-007324	Arabidopsis thaliana	45.49	2.00e-62	232.00
IUUC-Ago-007918	Ashbya gossypii	33.52	1.00e-48	186.00
IUUC-Acl-008362	Aspergillus clavatus	38.48	7.00e-62	231.00
IUUC-Afl-008690	Aspergillus flavus	46.43	3.00e-59	221.00
IUUC-Afu-008787	Aspergillus fumigatus	39.30	1.00e-60	226.00
IUUC-Ani-009385	Aspergillus nidulans	46.92	9.00e-52	197.00
IUUC-Ang-009709	Aspergillus niger	47.68	1.00e-58	220.00
IUUC-Aor-010240	Aspergillus oryzae	46.43	3.00e-59	221.00
IUUC-Ate-010551	Aspergillus terreus	45.80	2.00e-59	222.00
IUUC-Ame-011417	Astyanax mexicanus	79.65	2.00e-154	537.00
IUUC-Bgr-011986	Blumeria graminis	47.37	2.00e-56	212.00
IUUC-Bta-012559	Bos taurus	83.65	3.00e-122	430.00
IUUC-Bci-013767	Botrytis cinerea	47.11	9.00e-53	200.00
IUUC-Bdi-014336	Brachypodium distachyon	44.83	3.00e-60	225.00
IUUC-Bol-015824	Brassica oleracea	39.83	5.00e-61	227.00
IUUC-Bra-016732	Brassica rapa	39.54	5.00e-61	227.00
IUUC-Cel-018590	Caenorhabditis elegans	36.12	3.00e-44	172.00
IUUC-Cja-019487	Callithrix jacchus	88.63	1.00e-172	598.00
IUUC-Cfa-020497	Canis familiaris	88.92	1.00e-172	598.00
IUUC-Cpo-022150	Cavia porcellus	89.18	1.00e-172	598.00
IUUC-Cre-023007	Chlamydomonas reinhardtii	43.77	5.00e-53	200.00
IUUC-Csa-023602	Chlorocebus sabaeus	89.21	4.00e-173	600.00
IUUC-Cin-025594	Ciona intestinalis	51.20	2.00e-87	315.00
IUUC-Csv-026040	Ciona savignyi	49.28	8.00e-89	320.00
IUUC-Cgl-026460	Colletotrichum gloeosporioides	40.44	2.00e-46	179.00
IUUC-Cne-026990	Cryptococcus neoformans	36.24	2.00e-34	140.00
IUUC-Cme-027323	Cyanidioschyzon merolae	30.88	5.00e-37	147.00
IUUC-Dre-027987	Danio rerio	77.62	8.00e-149	519.00
IUUC-Dor-030294	Dipodomys ordii	87.17	5.00e-169	586.00
IUUC-Dse-031411	Dothistroma septosporum	34.57	5.00e-52	197.00
IUUC-Dme-031798	Drosophila melanogaster	50.00	5.00e-88	317.00
IUUC-Ete-032432	Echinops telfairi	87.46	6.00e-170	589.00
IUUC-Eca-034427	Equus caballus	89.21	4.00e-173	600.00
IUUC-Eeu-034917	Erinaceus europaeus	63.27	4.00e-106	377.00
IUUC-Fca-035380	Felis catus	88.92	1.00e-172	598.00
IUUC-Fal-037659	Ficedula albicollis	84.02	3.00e-163	566.00
IUUC-Fox-038062	Fusarium oxysporum	38.40	2.00e-20	91.70
IUUC-Fso-038111	Fusarium solani	32.54	5.00e-48	184.00
IUUC-Gmo-039298	Gadus morhua	77.68	2.00e-141	494.00
IUUC-Ggr-039771	Gaeumannomyces graminis	43.04	1.00e-50	193.00
IUUC-Gga-040313	Gallus gallus	84.84	5.00e-167	580.00
IUUC-Gac-042009	Gasterosteus aculeatus	76.88	2.00e-142	498.00
IUUC-Gma-043844	Glycine max	45.49	3.00e-62	231.00
IUUC-Hsa-046680	Homo sapiens	89.21	4.00e-173	600.00
IUUC-Hvu-047614	Hordeum vulgare	44.92	9.00e-61	226.00
IUUC-Itr-047987	Ictidomys tridecemlineatus	89.18	2.00e-172	598.00
IUUC-Kpa-049136	Komagataella pastoris	32.75	7.00e-50	190.00
IUUC-Lch-050607	Latimeria chalumnae	78.99	9.00e-151	525.00
IUUC-Lpe-050726	Leersia perrieri	43.48	3.00e-56	212.00
IUUC-Loc-051848	Lepisosteus oculatus	80.00	4.00e-156	543.00
IUUC-Lma-053187	Leptosphaeria maculans	37.26	3.00e-59	221.00
IUUC-Laf-053569	Loxodonta africana	87.54	4.00e-169	586.00
IUUC-Mcc-055275	Macaca mulatta	88.92	3.00e-172	597.00
IUUC-Mor-056967	Magnaporthe oryzae	34.04	3.00e-51	195.00
IUUC-Mpo-057399	Magnaporthe poae	43.48	5.00e-51	194.00
IUUC-Mtr-058353	Medicago truncatula	44.36	5.00e-60	224.00
IUUC-Mla-058830	Melampsora laricipopulina	37.55	3.00e-37	149.00
IUUC-Mga-059803	Meleagris gallopavo	82.55	1.00e-138	485.00
IUUC-Mvi-060456	Microbotryum violaceum	39.29	5.00e-40	158.00
IUUC-Mmr-060573	Microcebus murinus	88.92	9.00e-173	598.00
IUUC-Mdo-062831	Monodelphis domestica	86.59	9.00e-170	588.00
IUUC-Mmu-064302	Mus musculus	88.05	6.00e-171	592.00
IUUC-Mac-064745	Musa acuminata	44.78	1.00e-60	226.00
IUUC-Mpu-065922	Mustela putorius furo	88.92	5.00e-173	599.00
IUUC-Mlu-068236	Myotis lucifugus	88.12	9.00e-171	592.00
IUUC-Nfi-068417	Neosartorya fischeri	39.30	1.00e-60	226.00
IUUC-Ncr-068747	Neurospora crassa	35.88	9.00e-49	187.00
IUUC-Nle-069948	Nomascus leucogenys	92.73	0.00e+00	630.00
IUUC-Opr-070919	Ochotona princeps	80.88	2.00e-142	498.00
IUUC-Ont-071467	Oreochromis niloticus	77.39	2.00e-147	514.00
IUUC-Oan-073436	Ornithorhynchus anatinus	62.69	7.00e-64	235.00
IUUC-Ocu-074427	Oryctolagus cuniculus	87.46	6.00e-163	566.00
IUUC-Oba-075440	Oryza barthii	44.49	5.00e-61	228.00
IUUC-Obr-076275	Oryza brachyantha	43.87	1.00e-54	206.00
IUUC-Ogl-077237	Oryza glaberrima	44.49	5.00e-61	228.00
IUUC-Ogu-078934	Oryza glumaepatula	44.49	4.00e-61	228.00
IUUC-Oin-079475	Oryza indica	44.85	2.00e-61	229.00
IUUC-Olo-080285	Oryza longistaminata	49.01	2.00e-51	195.00
IUUC-Ome-081887	Oryza meridionalis	43.91	7.00e-61	227.00
IUUC-Oni-082064	Oryza nivara	44.85	2.00e-61	229.00
IUUC-Opu-083610	Oryza punctata	43.91	1.00e-60	226.00
IUUC-Oru-084911	Oryza rufipogon	39.71	1.00e-61	229.00
IUUC-Osa-085366	Oryza sativa	44.49	5.00e-61	228.00
IUUC-Ola-086846	Oryzias latipes	77.59	2.00e-144	504.00
IUUC-Olu-087879	Ostreococcus lucimarinus	39.86	2.00e-51	196.00
IUUC-Oga-089017	Otolemur garnettii	87.83	1.00e-169	588.00
IUUC-Oar-089970	Ovis aries	84.21	2.00e-161	561.00
IUUC-Ptr-091147	Pan troglodytes	80.87	3.00e-157	547.00
IUUC-Pan-091757	Papio anubis	82.27	2.00e-153	534.00
IUUC-Psi-093931	Pelodiscus sinensis	85.13	2.00e-167	581.00
IUUC-Pno-094775	Phaeosphaeria nodorum	43.50	5.00e-56	211.00
IUUC-Ppa-095156	Physcomitrella patens	44.62	2.00e-58	218.00
IUUC-Pfo-097295	Poecilia formosa	76.66	9.00e-147	512.00
IUUC-Pab-098537	Pongo abelii	89.21	4.00e-173	600.00
IUUC-Pop-099436	Populus trichocarpa	43.62	6.00e-62	230.00
IUUC-Pca-100631	Procavia capensis	87.57	3.00e-168	584.00
IUUC-Ppe-101259	Prunus persica	43.98	2.00e-61	229.00
IUUC-Pva-102679	Pteropus vampyrus	88.04	1.00e-161	561.00
IUUC-Pgr-103475	Puccinia graminis	38.75	2.00e-39	156.00
IUUC-Ptt-104012	Puccinia triticina	41.00	3.00e-16	79.30
IUUC-Pte-104071	Pyrenophora teres	43.50	7.00e-56	211.00
IUUC-Pyt-104501	Pyrenophora triticirepentis	43.50	7.00e-56	210.00
IUUC-Rno-104858	Rattus norvegicus	88.05	8.00e-171	592.00
IUUC-Sce-106174	Saccharomyces cerevisiae	35.16	3.00e-49	189.00
IUUC-Sha-107075	Sarcophilus harrisii	86.55	2.00e-169	587.00
IUUC-Sja-107663	Schizosaccharomyces japonicus	38.99	1.00e-54	206.00
IUUC-Spo-108259	Schizosaccharomyces pombe	39.78	7.00e-47	180.00
IUUC-Ssl-108473	Sclerotinia sclerotiorum	35.26	3.00e-46	178.00
IUUC-Smo-109290	Selaginella moellendorffii	46.04	1.00e-60	226.00
IUUC-Sit-109992	Setaria italica	44.61	3.00e-60	224.00
IUUC-Sly-110858	Solanum lycopersicum	44.40	5.00e-58	217.00
IUUC-Stu-112129	Solanum tuberosum	43.97	2.00e-58	219.00
IUUC-Sar-113061	Sorex araneus	88.92	5.00e-172	596.00
IUUC-Sbi-114882	Sorghum bicolor	39.71	9.00e-61	226.00
IUUC-Sre-115104	Sporisorium reilianum	40.09	2.00e-39	156.00
IUUC-Ssc-115403	Sus scrofa	88.34	7.00e-172	595.00
IUUC-Tgu-117013	Taeniopygia guttata	84.50	5.00e-166	576.00
IUUC-Tru-118307	Takifugu rubripes	77.62	2.00e-143	501.00
IUUC-Tsy-119309	Tarsius syrichta	88.73	1.00e-68	252.00
IUUC-Tni-120209	Tetraodon nigroviridis	77.10	1.00e-141	495.00
IUUC-Tca-121421	Theobroma cacao	44.74	4.00e-62	231.00
IUUC-Tre-122235	Trichoderma reesei	38.70	3.00e-46	179.00
IUUC-Tvi-122421	Trichoderma virens	38.91	9.00e-47	180.00
IUUC-Tae-124587	Triticum aestivum	44.92	5.00e-61	227.00
IUUC-Tur-126353	Triticum urartu	31.34	6.00e-21	95.90
IUUC-Tme-126918	Tuber melanosporum	45.18	1.00e-53	203.00
IUUC-Ttr-129286	Tursiops truncatus	90.67	6.00e-167	579.00
IUUC-Uma-129404	Ustilago maydis	40.97	9.00e-41	160.00
IUUC-Vda-129746	Verticillium dahliae	41.30	2.00e-49	189.00
IUUC-Vpa-130648	Vicugna pacos	100.00	2.00e-24	106.00
IUUC-Vvi-131301	Vitis vinifera	45.11	5.00e-61	227.00
IUUC-Xtr-132583	Xenopus tropicalis	81.34	6.00e-159	552.00
IUUC-Xma-133129	Xiphophorus maculatus	76.95	9.00e-147	512.00
IUUC-Yli-134515	Yarrowia lipolytica	39.22	7.00e-46	177.00
IUUC-Zma-135266	Zea mays	39.09	1.00e-60	226.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence