iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099836

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Kelch repeat-containing F-box family protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_548662; POPTR_0001s17860g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s17860	POPTR_0001s17860.1	POPTR_0001s17860.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	49.72	3.00e-100	362.00	IUUC-Ath-006894

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MELIPGLPYD IARDCLIRVK YKQLATVVSI CKSWKSETES PEFRRLRRAT CTGQKLVVMA 60
QARVNPNQAS NIMKNGVSPV YRFTLLEPDT GDWCELPPIP GFSNGLPLFC QVASVGSDLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCACAACAAA ACTTGCTCTG TTATCTCCCT GCTTTTATTT GGGCTCGTCA AACCTTCAGC 60
TAGTGACACT TTCGTGCTTG TTGATATCGT TTTTTTCCCC TTCTTTTAGT GGTCATGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR015915--Kelch-typ_b-propeller
IPR006652--Kelch_1

Pfam

PF01344--Kelch_1

SMART

SM00612--Kelch

Gene Ontology

GO:0005737--C:cytoplasm
GO:0019005--C:SCF ubiquitin ligase complex
GO:0031625--F:ubiquitin protein ligase binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0030162--P:regulation of proteolysis

KEGG

pop:POPTR_0001s17860g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002518	Amborella trichopoda	40.88	5.00e-74	270.00
IUUC-Apl-003699	Anas platyrhynchos	23.17	8.00e-08	50.80
IUUC-Aca-004959	Anolis carolinensis	24.59	5.00e-09	55.10
IUUC-Aly-005798	Arabidopsis lyrata	51.25	5.00e-107	380.00
IUUC-Ath-006894	Arabidopsis thaliana	49.72	2.00e-106	378.00
IUUC-Bdi-014921	Brachypodium distachyon	42.90	2.00e-80	291.00
IUUC-Bol-015429	Brassica oleracea	51.38	3.00e-103	367.00
IUUC-Bra-017279	Brassica rapa	51.10	4.00e-109	387.00
IUUC-Fal-036769	Ficedula albicollis	23.17	8.00e-09	54.70
IUUC-Gmo-039697	Gadus morhua	27.33	6.00e-11	62.00
IUUC-Gga-040678	Gallus gallus	23.17	8.00e-08	51.20
IUUC-Gma-042989	Glycine max	54.21	4.00e-116	410.00
IUUC-Hvu-047097	Hordeum vulgare	42.67	8.00e-70	256.00
IUUC-Lpe-050853	Leersia perrieri	41.87	2.00e-69	255.00
IUUC-Mor-057181	Magnaporthe oryzae	25.00	1.00e-07	50.10
IUUC-Mtr-058274	Medicago truncatula	52.51	6.00e-108	383.00
IUUC-Mga-059920	Meleagris gallopavo	23.98	2.00e-08	53.50
IUUC-Mac-065270	Musa acuminata	46.15	9.00e-96	342.00
IUUC-Ont-071273	Oreochromis niloticus	27.81	6.00e-12	65.50
IUUC-Oba-075850	Oryza barthii	38.07	2.00e-21	95.90
IUUC-Obr-076711	Oryza brachyantha	47.14	8.00e-50	189.00
IUUC-Ogl-077502	Oryza glaberrima	41.27	7.00e-60	223.00
IUUC-Ogu-078360	Oryza glumaepatula	41.69	6.00e-58	217.00
IUUC-Oin-079816	Oryza indica	41.01	1.00e-58	219.00
IUUC-Ome-081176	Oryza meridionalis	40.74	5.00e-69	254.00
IUUC-Oni-082714	Oryza nivara	41.27	7.00e-60	223.00
IUUC-Opu-083272	Oryza punctata	41.91	4.00e-73	267.00
IUUC-Oru-084247	Oryza rufipogon	42.33	3.00e-65	241.00
IUUC-Osa-085360	Oryza sativa	41.27	7.00e-60	223.00
IUUC-Psi-093671	Pelodiscus sinensis	24.04	2.00e-09	57.00
IUUC-Ppe-101539	Prunus persica	64.79	3.00e-140	490.00
IUUC-Sit-110557	Setaria italica	37.30	3.00e-50	191.00
IUUC-Sly-110913	Solanum lycopersicum	55.77	1.00e-118	419.00
IUUC-Stu-112061	Solanum tuberosum	56.34	3.00e-119	421.00
IUUC-Sbi-114056	Sorghum bicolor	42.34	2.00e-67	248.00
IUUC-Tca-121805	Theobroma cacao	60.50	1.00e-131	461.00
IUUC-Tae-125904	Triticum aestivum	42.71	2.00e-69	255.00
IUUC-Tme-126946	Tuber melanosporum	24.72	3.90e-01	30.00
IUUC-Vvi-130895	Vitis vinifera	57.30	1.00e-120	425.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence