iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016179

Ensembl Protein ID

Bo6g108490.1

UniProt Accession

A0A0D3CZ49; A0A0D3CZ49_BRAOL

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo6g108490	Bo6g108490.1	Bo6g108490.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.00e-21	78.3	270	344

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++++f+Cp+++e+M+dPv++++G+t +r+++ +w+++ g     +cPvt+q+l  + l Pnl+l+ +i +w  +n+
   Q: 270  PYQAFICPLTKEVMEDPVTTETGVTCERQAVTEWFDKFGDsdeiSCPVTGQKL-TTGLSPNLVLKTIIGEWKVRNE 344
           5799*******************************888888888*********.789**************99986 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MEIQTGESSI TCPTDVIESL SESIEAAKYL LEITQESNGP ESTTDLTSIE AGFQGVVKQI 60
GETLQSIPEA IIDEEEYIGV VVQSLSNEMQ NANIGDGSKS EILQNIQQKI SERRTQEELV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGATAC AGACAGGAGA GAGTTCCATC ACATGTCCAA CGGATGTGAT TGAATCACTA 60
TCCGAGAGTA TAGAAGCAGC CAAGTACCTC CTCGAGATAA CTCAAGAAAG CAACGGACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000318	Aegilops tauschii	40.36	0.00e+00	627.00
IUUC-Atr-002664	Amborella trichopoda	46.26	2.00e-180	625.00
IUUC-Aly-006424	Arabidopsis lyrata	83.82	0.00e+00	1747.00
IUUC-Ath-006596	Arabidopsis thaliana	82.49	0.00e+00	1644.00
IUUC-Bdi-014572	Brachypodium distachyon	45.19	0.00e+00	664.00
IUUC-Bra-017617	Brassica rapa	93.67	0.00e+00	1923.00
IUUC-Hvu-047634	Hordeum vulgare	44.14	0.00e+00	632.00
IUUC-Lpe-050817	Leersia perrieri	42.70	0.00e+00	655.00
IUUC-Mvi-060551	Microbotryum violaceum	33.33	1.20e+00	29.60
IUUC-Mac-065538	Musa acuminata	45.59	0.00e+00	644.00
IUUC-Oba-075004	Oryza barthii	43.77	0.00e+00	661.00
IUUC-Obr-076391	Oryza brachyantha	42.33	2.00e-168	585.00
IUUC-Ogl-077375	Oryza glaberrima	43.77	0.00e+00	661.00
IUUC-Ogu-078488	Oryza glumaepatula	43.89	0.00e+00	665.00
IUUC-Oin-079369	Oryza indica	43.85	0.00e+00	664.00
IUUC-Olo-080998	Oryza longistaminata	43.01	0.00e+00	636.00
IUUC-Ome-081243	Oryza meridionalis	43.53	0.00e+00	656.00
IUUC-Oni-082268	Oryza nivara	44.01	0.00e+00	665.00
IUUC-Opu-083388	Oryza punctata	43.86	0.00e+00	689.00
IUUC-Oru-084387	Oryza rufipogon	43.77	0.00e+00	664.00
IUUC-Osa-086255	Oryza sativa	43.85	0.00e+00	664.00
IUUC-Pop-099505	Populus trichocarpa	57.57	0.00e+00	892.00
IUUC-Ppe-101776	Prunus persica	56.99	0.00e+00	901.00
IUUC-Sit-110322	Setaria italica	44.87	0.00e+00	633.00
IUUC-Sly-111047	Solanum lycopersicum	53.55	0.00e+00	840.00
IUUC-Stu-112113	Solanum tuberosum	53.30	0.00e+00	835.00
IUUC-Sbi-113818	Sorghum bicolor	43.79	0.00e+00	630.00
IUUC-Tca-121365	Theobroma cacao	62.13	0.00e+00	962.00
IUUC-Tae-123677	Triticum aestivum	44.12	5.00e-178	618.00
IUUC-Tur-126161	Triticum urartu	43.87	2.00e-176	612.00
IUUC-Vvi-131502	Vitis vinifera	57.12	0.00e+00	895.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence