iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	26.80	5.00e-07	51.60	IUUC-Ath-007424

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MDFNYHVDSA LTTLLENQKF FKEMAEVVSD FSDGREIQKL LDQNVDLAEN LIRMKSKHQL 60
LSKAMKHAKN SSNTIEKFEE VWKERSEAVE QKRIDVKNSA EFKNFMKAAA PQAGAETNGQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTATGTTGGG GATATGGTCA CTCTAAGTTA ACTCATTTTA CATTTTATTT TAGAGTCGCT 60
AATTTGACGC ACATTTATTT TACTTAAATT TCAGGCATAA AATCCATGCT TATACACCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR026846--Nse2(Mms21)
IPR004181--Znf_MIZ
IPR013083--Znf_RING/FYVE/PHD

Pfam

PF11789--zf-Nse

Gene Ontology

GO:0005634--C:nucleus
GO:0030915--C:Smc5-Smc6 complex
GO:0019789--F:SUMO transferase activity
GO:0008270--F:zinc ion binding
GO:0006281--P:DNA repair
GO:0000724--P:double-strand break repair via homologous recombination

KEGG

dme:Dmel_CG15645

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000276	Aegilops tauschii	30.00	2.00e-10	58.20
IUUC-Atr-002438	Amborella trichopoda	31.51	1.00e-05	42.40
IUUC-Aly-006133	Arabidopsis lyrata	25.77	3.00e-07	47.80
IUUC-Ath-007424	Arabidopsis thaliana	26.80	3.00e-08	51.60
IUUC-Ani-009414	Aspergillus nidulans	30.30	1.20e-01	30.40
IUUC-Bci-013738	Botrytis cinerea	26.26	5.00e-05	41.60
IUUC-Bdi-014403	Brachypodium distachyon	35.45	9.00e-12	63.20
IUUC-Bol-015454	Brassica oleracea	30.85	2.00e-08	51.60
IUUC-Bra-017093	Brassica rapa	30.86	2.00e-06	45.80
IUUC-Cel-018588	Caenorhabditis elegans	47.83	1.00e-07	48.90
IUUC-Cgl-026430	Colletotrichum gloeosporioides	32.08	1.80e-02	32.70
IUUC-Cme-027175	Cyanidioschyzon merolae	31.48	3.00e-03	35.00
IUUC-Fso-038272	Fusarium solani	28.57	1.00e-03	37.00
IUUC-Ggr-040059	Gaeumannomyces graminis	34.69	7.00e-04	37.70
IUUC-Gma-043177	Glycine max	22.91	2.00e-06	45.40
IUUC-Hvu-047252	Hordeum vulgare	30.19	8.00e-11	59.70
IUUC-Kpa-049181	Komagataella pastoris	37.29	2.00e-04	39.30
IUUC-Lpe-051150	Leersia perrieri	26.60	4.00e-08	51.20
IUUC-Loc-052687	Lepisosteus oculatus	33.82	4.00e-07	47.40
IUUC-Mpo-057462	Magnaporthe poae	34.69	1.00e-03	37.00
IUUC-Mtr-058011	Medicago truncatula	28.44	5.00e-07	47.00
IUUC-Mac-065639	Musa acuminata	28.00	8.00e-08	50.10
IUUC-Ncr-068773	Neurospora crassa	33.33	2.00e-03	36.60
IUUC-Oan-072777	Ornithorhynchus anatinus	45.83	3.00e-03	32.00
IUUC-Oba-075725	Oryza barthii	27.84	2.00e-06	45.10
IUUC-Obr-076506	Oryza brachyantha	28.28	2.00e-07	48.50
IUUC-Ogu-079018	Oryza glumaepatula	30.61	1.00e-07	48.90
IUUC-Oin-079792	Oryza indica	29.90	1.00e-07	48.90
IUUC-Ome-081426	Oryza meridionalis	29.90	2.00e-07	48.10
IUUC-Oni-082286	Oryza nivara	29.90	1.00e-07	48.90
IUUC-Opu-083586	Oryza punctata	29.90	2.00e-07	48.10
IUUC-Oru-085158	Oryza rufipogon	29.90	1.00e-07	48.90
IUUC-Pno-094931	Phaeosphaeria nodorum	25.81	6.40e-02	31.20
IUUC-Ppa-095570	Physcomitrella patens	29.03	4.00e-05	40.80
IUUC-Pop-099559	Populus trichocarpa	23.77	4.00e-10	57.80
IUUC-Ppe-101873	Prunus persica	29.31	4.00e-08	50.80
IUUC-Spo-108327	Schizosaccharomyces pombe	28.05	9.00e-05	39.70
IUUC-Ssl-108555	Sclerotinia sclerotiorum	26.32	3.00e-03	35.40
IUUC-Smo-109438	Selaginella moellendorffii	36.67	9.00e-05	39.70
IUUC-Sit-109919	Setaria italica	31.94	2.00e-06	45.80
IUUC-Sly-111667	Solanum lycopersicum	26.94	6.00e-10	57.00
IUUC-Stu-112211	Solanum tuberosum	25.79	3.00e-09	54.70
IUUC-Sbi-113916	Sorghum bicolor	34.72	2.00e-08	51.60
IUUC-Tru-117771	Takifugu rubripes	32.98	7.00e-09	53.10
IUUC-Tni-119821	Tetraodon nigroviridis	38.36	2.00e-09	55.10
IUUC-Tca-121272	Theobroma cacao	31.08	2.00e-06	45.10
IUUC-Tre-122049	Trichoderma reesei	26.42	1.40e-02	33.10
IUUC-Tvi-122642	Trichoderma virens	20.00	4.00e-04	38.50
IUUC-Tae-122969	Triticum aestivum	30.91	2.00e-10	58.90
IUUC-Tur-126346	Triticum urartu	30.91	1.00e-10	58.90
IUUC-Vvi-131486	Vitis vinifera	28.57	2.00e-06	45.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence