iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pyt-104580

Ensembl Protein ID

EDU46373

UniProt Accession

B2W287; B2W287_PYRTR

Genbank Protein ID

EDU46373.1

Protein Name

DNA repair protein RAD23-like protein

Genbank Nucleotide ID

DS231617

Gene Name

PTRG_03535

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTRG_03535	EDU46373	EDU46373

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	9.30e-17	59.9	142	180
ULD/UDP/UBQ/UBQ_PIM	1.80e-23	81.6	1	75

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLldg 41
           +e +++++++MGF r ++ +a+raa+ n+++AveyLl+g
   Q: 142  REAAIANMESMGFARADIDRAMRAAFFNPDRAVEYLLTG 180
           6889*********************************97 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mk+t+k lk+++f +e+++++t+ +lK+ki++e+g ++ qqkLIy+GkiL+D+ t+++++i+++ +++++v+k+k
   Q: 1    MKITFKDLKQNKFVIEAEPSETIGALKAKIQAEKGWEVPQQKLIYSGKILQDANTVESYNIEEKGFIVCMVSKPK 75
           99**********************************************************************997 PP

Organism

Pyrenophora triticirepentis

Protein Sequence
(Fasta)

MKITFKDLKQ NKFVIEAEPS ETIGALKAKI QAEKGWEVPQ QKLIYSGKIL QDANTVESYN 60
IEEKGFIVCM VSKPKAAAGA ASSSKAAPST PAPVAAQTPA APSAPAPSSN PQNAPATPSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGATCA CGTTCAAGGT AGGCTTTCAT TGCAGCCCGC GGTCCTTACC GCATGCCAGC 60
ACCGCTGACA CATGCCCAGG ATCTCAAGCA GAACAAGTTC GTCATCGAGG CCGAGCCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005635--C:nuclear envelope
GO:0000111--C:nucleotide-excision repair factor 2 complex
GO:0000502--C:proteasome complex
GO:0003684--F:damaged DNA binding
GO:0000224--F:peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity
GO:0042177--P:negative regulation of protein catabolic process
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0006289--P:nucleotide-excision repair
GO:0006517--P:protein deglycosylation
GO:0016567--P:protein ubiquitination
GO:0030433--P:ubiquitin-dependent ERAD pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	40.31	3.00e-30	124.00
IUUC-Aml-001195	Ailuropoda melanoleuca	45.54	1.00e-18	85.90
IUUC-Atr-002756	Amborella trichopoda	38.93	4.00e-34	137.00
IUUC-Apl-003371	Anas platyrhynchos	39.77	2.00e-28	117.00
IUUC-Aca-004599	Anolis carolinensis	43.90	5.00e-18	84.00
IUUC-Aly-005486	Arabidopsis lyrata	38.46	1.00e-28	119.00
IUUC-Ath-006688	Arabidopsis thaliana	47.69	4.00e-23	100.00
IUUC-Ago-007830	Ashbya gossypii	31.02	2.00e-18	85.10
IUUC-Acl-008212	Aspergillus clavatus	63.92	2.00e-64	238.00
IUUC-Afl-008605	Aspergillus flavus	62.11	1.00e-65	241.00
IUUC-Afu-008877	Aspergillus fumigatus	64.29	7.00e-65	239.00
IUUC-Ani-009460	Aspergillus nidulans	61.90	1.00e-59	221.00
IUUC-Aor-010032	Aspergillus oryzae	62.11	7.00e-66	242.00
IUUC-Ate-010458	Aspergillus terreus	62.07	2.00e-73	267.00
IUUC-Ame-011704	Astyanax mexicanus	49.25	1.00e-21	94.40
IUUC-Bgr-012056	Blumeria graminis	60.16	2.00e-53	201.00
IUUC-Bta-012922	Bos taurus	40.08	2.00e-29	121.00
IUUC-Bci-013933	Botrytis cinerea	62.30	1.00e-61	228.00
IUUC-Bdi-014452	Brachypodium distachyon	34.15	1.00e-35	141.00
IUUC-Bol-016300	Brassica oleracea	35.19	4.00e-39	153.00
IUUC-Bra-016970	Brassica rapa	35.44	1.00e-38	151.00
IUUC-Cel-018364	Caenorhabditis elegans	36.99	2.00e-08	51.20
IUUC-Cja-018772	Callithrix jacchus	39.69	9.00e-28	115.00
IUUC-Cfa-020683	Canis familiaris	45.54	1.00e-18	85.90
IUUC-Cpo-022145	Cavia porcellus	52.38	1.00e-20	92.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	41.32	3.00e-15	73.90
IUUC-Csa-023714	Chlorocebus sabaeus	39.69	6.00e-28	116.00
IUUC-Cho-024814	Choloepus hoffmanni	45.54	6.00e-19	86.70
IUUC-Cin-025741	Ciona intestinalis	37.90	2.00e-15	74.30
IUUC-Csv-025823	Ciona savignyi	51.35	3.00e-14	70.50
IUUC-Cgl-026495	Colletotrichum gloeosporioides	82.22	7.00e-40	155.00
IUUC-Cne-027056	Cryptococcus neoformans	52.11	3.00e-16	77.80
IUUC-Dre-028369	Danio rerio	39.69	5.00e-29	120.00
IUUC-Dno-029543	Dasypus novemcinctus	39.31	2.00e-28	117.00
IUUC-Dor-030358	Dipodomys ordii	39.61	3.00e-28	117.00
IUUC-Dse-031336	Dothistroma septosporum	64.00	1.00e-69	254.00
IUUC-Dme-032027	Drosophila melanogaster	29.24	3.00e-22	97.80
IUUC-Ete-032583	Echinops telfairi	45.54	2.00e-18	85.10
IUUC-Eca-034243	Equus caballus	39.69	8.00e-29	119.00
IUUC-Fca-035679	Felis catus	37.79	7.00e-27	113.00
IUUC-Fal-037148	Ficedula albicollis	38.64	8.00e-28	116.00
IUUC-Fox-037960	Fusarium oxysporum	84.75	3.00e-46	177.00
IUUC-Fso-038107	Fusarium solani	54.50	2.00e-88	317.00
IUUC-Gmo-039080	Gadus morhua	50.40	3.00e-18	84.00
IUUC-Ggr-040116	Gaeumannomyces graminis	88.14	2.00e-47	181.00
IUUC-Gga-040544	Gallus gallus	49.65	7.00e-20	89.70
IUUC-Gac-042298	Gasterosteus aculeatus	36.26	3.00e-25	107.00
IUUC-Gma-043937	Glycine max	40.93	6.00e-31	126.00
IUUC-Ggo-045125	Gorilla gorilla	39.69	9.00e-28	115.00
IUUC-Hsa-046519	Homo sapiens	39.69	9.00e-28	115.00
IUUC-Hvu-047832	Hordeum vulgare	40.54	6.00e-30	123.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	45.54	1.00e-18	85.50
IUUC-Kpa-049314	Komagataella pastoris	34.39	5.00e-47	179.00
IUUC-Lch-050553	Latimeria chalumnae	55.91	3.00e-14	70.90
IUUC-Lpe-050929	Leersia perrieri	39.92	6.00e-30	123.00
IUUC-Loc-051748	Lepisosteus oculatus	55.81	1.00e-19	89.00
IUUC-Lma-053328	Leptosphaeria maculans	88.73	5.00e-33	130.00
IUUC-Laf-054293	Loxodonta africana	38.55	2.00e-27	114.00
IUUC-Mcc-055600	Macaca mulatta	39.69	1.00e-27	115.00
IUUC-Meu-056082	Macropus eugenii	45.95	2.00e-18	85.10
IUUC-Mor-057287	Magnaporthe oryzae	88.18	7.00e-43	166.00
IUUC-Mpo-057609	Magnaporthe poae	86.44	7.00e-47	179.00
IUUC-Mtr-058713	Medicago truncatula	39.30	3.00e-30	124.00
IUUC-Mla-058961	Melampsora laricipopulina	45.86	3.00e-21	94.40
IUUC-Mvi-060220	Microbotryum violaceum	55.71	4.00e-17	80.90
IUUC-Mmr-061159	Microcebus murinus	39.54	1.00e-27	115.00
IUUC-Mdo-062742	Monodelphis domestica	38.17	4.00e-30	123.00
IUUC-Mmu-063258	Mus musculus	39.42	6.00e-28	116.00
IUUC-Mac-064724	Musa acuminata	41.25	2.00e-33	134.00
IUUC-Mpu-066389	Mustela putorius furo	45.54	6.00e-19	86.70
IUUC-Mlu-067999	Myotis lucifugus	38.64	2.00e-27	115.00
IUUC-Nfi-068390	Neosartorya fischeri	64.68	1.00e-64	238.00
IUUC-Ncr-068685	Neurospora crassa	56.97	5.00e-50	189.00
IUUC-Nle-069655	Nomascus leucogenys	39.69	7.00e-28	116.00
IUUC-Ont-072484	Oreochromis niloticus	40.86	5.00e-33	133.00
IUUC-Oan-073258	Ornithorhynchus anatinus	45.95	2.00e-18	83.60
IUUC-Ocu-074831	Oryctolagus cuniculus	46.02	5.00e-19	87.00
IUUC-Oba-075872	Oryza barthii	36.78	5.00e-28	116.00
IUUC-Obr-076631	Oryza brachyantha	45.80	2.00e-21	94.70
IUUC-Ogl-077021	Oryza glaberrima	36.78	5.00e-28	116.00
IUUC-Ogu-078101	Oryza glumaepatula	36.67	1.00e-29	122.00
IUUC-Oin-079727	Oryza indica	35.29	1.00e-26	112.00
IUUC-Olo-080382	Oryza longistaminata	36.67	1.00e-29	122.00
IUUC-Ome-081652	Oryza meridionalis	36.67	9.00e-30	122.00
IUUC-Oni-082847	Oryza nivara	36.78	5.00e-28	116.00
IUUC-Opu-083789	Oryza punctata	37.04	7.00e-30	122.00
IUUC-Oru-085266	Oryza rufipogon	35.29	4.00e-26	110.00
IUUC-Osa-085859	Oryza sativa	35.29	4.00e-26	110.00
IUUC-Ola-086540	Oryzias latipes	34.31	2.00e-23	102.00
IUUC-Olu-087843	Ostreococcus lucimarinus	39.25	1.00e-29	122.00
IUUC-Oga-088023	Otolemur garnettii	38.11	2.00e-27	114.00
IUUC-Oar-089964	Ovis aries	39.31	2.00e-28	118.00
IUUC-Ptr-091165	Pan troglodytes	39.69	1.00e-27	115.00
IUUC-Pan-092009	Papio anubis	39.25	2.00e-26	111.00
IUUC-Psi-093477	Pelodiscus sinensis	45.54	2.00e-16	78.20
IUUC-Pno-095064	Phaeosphaeria nodorum	71.51	8.00e-89	318.00
IUUC-Ppa-095654	Physcomitrella patens	52.76	1.00e-23	102.00
IUUC-Pfo-097385	Poecilia formosa	38.87	2.00e-30	124.00
IUUC-Pab-097868	Pongo abelii	39.69	2.00e-27	114.00
IUUC-Pop-099726	Populus trichocarpa	39.69	2.00e-27	114.00
IUUC-Pca-100348	Procavia capensis	38.43	2.00e-27	114.00
IUUC-Ppe-101830	Prunus persica	41.60	1.00e-28	118.00
IUUC-Pva-102137	Pteropus vampyrus	39.69	5.00e-29	120.00
IUUC-Pgr-103641	Puccinia graminis	42.80	8.00e-29	119.00
IUUC-Ptt-103717	Puccinia triticina	40.98	3.00e-33	134.00
IUUC-Pte-104303	Pyrenophora teres	99.22	2.00e-86	310.00
IUUC-Rno-104844	Rattus norvegicus	39.93	7.00e-28	116.00
IUUC-Sce-106214	Saccharomyces cerevisiae	41.60	2.00e-16	78.60
IUUC-Sha-107073	Sarcophilus harrisii	45.95	1.00e-18	85.50
IUUC-Sja-107851	Schizosaccharomyces japonicus	52.02	2.00e-46	177.00
IUUC-Spo-108298	Schizosaccharomyces pombe	49.80	1.00e-52	198.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	80.41	2.00e-43	167.00
IUUC-Smo-109129	Selaginella moellendorffii	39.69	1.00e-23	102.00
IUUC-Sit-109813	Setaria italica	37.74	1.00e-29	122.00
IUUC-Sly-111480	Solanum lycopersicum	39.84	1.00e-33	135.00
IUUC-Stu-112054	Solanum tuberosum	40.62	1.00e-31	129.00
IUUC-Sar-112925	Sorex araneus	45.54	1.00e-18	85.50
IUUC-Sbi-113871	Sorghum bicolor	36.82	6.00e-27	113.00
IUUC-Sre-114894	Sporisorium reilianum	50.70	2.00e-14	72.00
IUUC-Ssc-116329	Sus scrofa	39.69	7.00e-29	119.00
IUUC-Tgu-116918	Taeniopygia guttata	38.64	9.00e-28	115.00
IUUC-Tru-117920	Takifugu rubripes	39.68	2.00e-32	131.00
IUUC-Tsy-118836	Tarsius syrichta	45.54	1.00e-18	85.50
IUUC-Tni-120493	Tetraodon nigroviridis	40.32	1.00e-31	129.00
IUUC-Tca-121594	Theobroma cacao	38.93	1.00e-29	121.00
IUUC-Tre-121911	Trichoderma reesei	56.61	1.00e-77	281.00
IUUC-Tvi-122617	Trichoderma virens	85.59	3.00e-47	180.00
IUUC-Tae-125620	Triticum aestivum	39.38	2.00e-30	124.00
IUUC-Tur-126610	Triticum urartu	39.92	2.00e-30	125.00
IUUC-Tme-127092	Tuber melanosporum	55.25	5.00e-82	296.00
IUUC-Tbe-127493	Tupaia belangeri	47.32	2.00e-18	85.10
IUUC-Ttr-128464	Tursiops truncatus	39.69	9.00e-29	119.00
IUUC-Uma-129484	Ustilago maydis	49.30	2.00e-13	68.20
IUUC-Vda-129946	Verticillium dahliae	84.43	4.00e-48	183.00
IUUC-Vpa-130357	Vicugna pacos	53.06	6.00e-10	56.60
IUUC-Vvi-130842	Vitis vinifera	39.62	8.00e-30	122.00
IUUC-Xtr-132679	Xenopus tropicalis	50.00	2.00e-14	71.60
IUUC-Xma-133503	Xiphophorus maculatus	38.75	6.00e-32	129.00
IUUC-Yli-134615	Yarrowia lipolytica	56.80	7.00e-25	106.00
IUUC-Zma-135929	Zea mays	36.62	1.00e-41	162.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence