iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115510

Ensembl Protein ID

ENSSSCP00000006459.2

UniProt Accession

F1S1E1; F1S1E1_PIG

Genbank Protein ID

ENSSSCP00000006459

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU469011

Gene Name

DCAF13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000006048.2	ENSSSCT00000006637.2	ENSSSCP00000006459.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.70e-22	76.9	64	103

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH d+v+cla    +  +++sG+ Dg +++W+l++ ++++
   Q: 64   GHRDGVNCLAKhpKSlATVLSGACDGEVRIWNLTKRKCIR 103
           8********844422344899*************999987 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MKVKMLSRNP DNYVRETKLD LQRVPRNYDP ALHPFEVPRE YVRALNATKL ERVFAKPFLA 60
SLDGHRDGVN CLAKHPKSLA TVLSGACDGE VRIWNLTKRK CIRTIQAHEG FVRGICTRFC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGGTGA AGATGCTGAG CCGGAACCCG GACAACTATG TCCGCGAAAC TAAATTGGAC 60
TTACAGAGAG GTGAGACAAG TTAGTTGGGA GTTTGCCAAC CTTGGCTTCT ACTGAATAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR007287--Sof1
IPR013979--TIF_beta_prop-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08662--eIF2A
PF04158--Sof1
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030054--C:cell junction
GO:0005813--C:centrosome
GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

ssc:100155764

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002178	Ailuropoda melanoleuca	95.28	0.00e+00	894.00
IUUC-Atr-002799	Amborella trichopoda	47.12	2.00e-132	465.00
IUUC-Apl-003675	Anas platyrhynchos	84.98	0.00e+00	785.00
IUUC-Aca-004792	Anolis carolinensis	86.07	0.00e+00	830.00
IUUC-Aly-005998	Arabidopsis lyrata	46.46	7.00e-130	456.00
IUUC-Ath-007526	Arabidopsis thaliana	46.68	7.00e-130	456.00
IUUC-Ago-007774	Ashbya gossypii	46.55	2.00e-117	415.00
IUUC-Acl-008024	Aspergillus clavatus	43.55	5.00e-106	377.00
IUUC-Afu-008930	Aspergillus fumigatus	43.29	1.00e-103	369.00
IUUC-Ani-009370	Aspergillus nidulans	43.08	2.00e-106	379.00
IUUC-Ang-009827	Aspergillus niger	44.87	2.00e-109	388.00
IUUC-Aor-010060	Aspergillus oryzae	43.75	3.00e-102	365.00
IUUC-Ate-010434	Aspergillus terreus	45.15	1.00e-91	329.00
IUUC-Ame-011967	Astyanax mexicanus	72.83	0.00e+00	708.00
IUUC-Bgr-011989	Blumeria graminis	44.22	2.00e-109	389.00
IUUC-Bta-013291	Bos taurus	69.49	0.00e+00	634.00
IUUC-Bci-013868	Botrytis cinerea	42.60	3.00e-105	374.00
IUUC-Bdi-014343	Brachypodium distachyon	48.23	1.00e-123	436.00
IUUC-Bol-015740	Brassica oleracea	45.13	1.00e-120	426.00
IUUC-Bra-016689	Brassica rapa	45.13	3.00e-119	421.00
IUUC-Cel-018536	Caenorhabditis elegans	49.39	2.00e-122	432.00
IUUC-Cja-018779	Callithrix jacchus	96.63	0.00e+00	914.00
IUUC-Cfa-020105	Canis familiaris	97.08	0.00e+00	913.00
IUUC-Cpo-021538	Cavia porcellus	93.48	0.00e+00	860.00
IUUC-Cre-022798	Chlamydomonas reinhardtii	51.53	5.00e-48	182.00
IUUC-Csa-023492	Chlorocebus sabaeus	96.63	0.00e+00	911.00
IUUC-Cho-024497	Choloepus hoffmanni	83.07	9.00e-157	546.00
IUUC-Cin-025524	Ciona intestinalis	62.90	1.00e-171	595.00
IUUC-Csv-026197	Ciona savignyi	64.03	6.00e-176	609.00
IUUC-Cgl-026745	Colletotrichum gloeosporioides	39.87	6.00e-95	340.00
IUUC-Cne-026840	Cryptococcus neoformans	34.02	1.00e-77	285.00
IUUC-Cme-027111	Cyanidioschyzon merolae	34.43	5.00e-73	268.00
IUUC-Dre-027471	Danio rerio	73.96	0.00e+00	717.00
IUUC-Dno-029790	Dasypus novemcinctus	91.69	0.00e+00	700.00
IUUC-Dor-030971	Dipodomys ordii	75.51	0.00e+00	694.00
IUUC-Dse-031563	Dothistroma septosporum	43.90	3.00e-105	375.00
IUUC-Dme-032161	Drosophila melanogaster	59.28	2.00e-163	568.00
IUUC-Ete-033127	Echinops telfairi	87.92	0.00e+00	822.00
IUUC-Eca-033531	Equus caballus	95.52	0.00e+00	856.00
IUUC-Eeu-034663	Erinaceus europaeus	81.43	0.00e+00	744.00
IUUC-Fca-036258	Felis catus	97.30	0.00e+00	915.00
IUUC-Fal-037456	Ficedula albicollis	87.87	0.00e+00	794.00
IUUC-Fox-038025	Fusarium oxysporum	42.95	7.00e-104	370.00
IUUC-Fso-038344	Fusarium solani	42.22	5.00e-101	361.00
IUUC-Gmo-039643	Gadus morhua	74.61	0.00e+00	740.00
IUUC-Ggr-039816	Gaeumannomyces graminis	44.94	3.00e-104	372.00
IUUC-Gga-040143	Gallus gallus	88.76	0.00e+00	827.00
IUUC-Gac-041665	Gasterosteus aculeatus	75.98	0.00e+00	736.00
IUUC-Gma-043073	Glycine max	46.24	6.00e-125	440.00
IUUC-Ggo-045058	Gorilla gorilla	96.40	0.00e+00	910.00
IUUC-Hsa-046843	Homo sapiens	95.96	0.00e+00	907.00
IUUC-Hvu-047654	Hordeum vulgare	47.02	1.00e-72	265.00
IUUC-Itr-048822	Ictidomys tridecemlineatus	95.73	0.00e+00	899.00
IUUC-Kpa-049232	Komagataella pastoris	46.39	6.00e-121	427.00
IUUC-Lch-050542	Latimeria chalumnae	78.18	0.00e+00	795.00
IUUC-Lpe-051622	Leersia perrieri	48.23	3.00e-126	444.00
IUUC-Loc-052674	Lepisosteus oculatus	74.73	0.00e+00	724.00
IUUC-Lma-053108	Leptosphaeria maculans	42.86	4.00e-106	377.00
IUUC-Laf-053385	Loxodonta africana	94.61	0.00e+00	877.00
IUUC-Mcc-055151	Macaca mulatta	96.18	0.00e+00	909.00
IUUC-Meu-056230	Macropus eugenii	92.86	4.00e-122	430.00
IUUC-Mor-057013	Magnaporthe oryzae	43.02	3.00e-99	355.00
IUUC-Mpo-057530	Magnaporthe poae	44.94	4.00e-105	374.00
IUUC-Mtr-058187	Medicago truncatula	46.90	6.00e-128	450.00
IUUC-Mla-058964	Melampsora laricipopulina	39.87	5.00e-93	334.00
IUUC-Mga-059712	Meleagris gallopavo	87.82	0.00e+00	786.00
IUUC-Mvi-060370	Microbotryum violaceum	33.75	9.00e-74	270.00
IUUC-Mmr-061340	Microcebus murinus	90.20	0.00e+00	841.00
IUUC-Mdo-062978	Monodelphis domestica	88.09	0.00e+00	844.00
IUUC-Mmu-063439	Mus musculus	93.03	0.00e+00	880.00
IUUC-Mac-065129	Musa acuminata	47.10	2.00e-129	455.00
IUUC-Mpu-066548	Mustela putorius furo	86.39	0.00e+00	702.00
IUUC-Mlu-067660	Myotis lucifugus	95.73	0.00e+00	903.00
IUUC-Nfi-068455	Neosartorya fischeri	44.55	1.00e-106	379.00
IUUC-Ncr-068848	Neurospora crassa	42.01	2.00e-95	342.00
IUUC-Nle-069923	Nomascus leucogenys	96.18	0.00e+00	906.00
IUUC-Opr-070279	Ochotona princeps	80.53	2.00e-89	322.00
IUUC-Ont-072234	Oreochromis niloticus	76.85	0.00e+00	756.00
IUUC-Oan-073713	Ornithorhynchus anatinus	84.54	2.00e-103	367.00
IUUC-Ocu-073782	Oryctolagus cuniculus	95.06	0.00e+00	896.00
IUUC-Oba-075161	Oryza barthii	48.23	1.00e-126	446.00
IUUC-Obr-076868	Oryza brachyantha	48.23	8.00e-126	443.00
IUUC-Ogl-077062	Oryza glaberrima	48.23	1.00e-126	446.00
IUUC-Ogu-078308	Oryza glumaepatula	48.23	1.00e-126	446.00
IUUC-Oin-079378	Oryza indica	48.23	1.00e-126	446.00
IUUC-Olo-080638	Oryza longistaminata	46.02	2.00e-117	415.00
IUUC-Oni-082368	Oryza nivara	48.23	1.00e-126	446.00
IUUC-Opu-083628	Oryza punctata	48.23	1.00e-126	446.00
IUUC-Oru-085226	Oryza rufipogon	48.01	4.00e-126	444.00
IUUC-Osa-085368	Oryza sativa	44.87	1.00e-67	249.00
IUUC-Ola-086836	Oryzias latipes	78.20	0.00e+00	769.00
IUUC-Olu-087755	Ostreococcus lucimarinus	45.54	3.00e-124	438.00
IUUC-Oga-088170	Otolemur garnettii	94.83	0.00e+00	899.00
IUUC-Oar-089388	Ovis aries	96.18	0.00e+00	904.00
IUUC-Ptr-090494	Pan troglodytes	96.40	0.00e+00	909.00
IUUC-Pan-091697	Papio anubis	96.63	0.00e+00	911.00
IUUC-Psi-093916	Pelodiscus sinensis	84.04	0.00e+00	779.00
IUUC-Pno-095004	Phaeosphaeria nodorum	40.40	3.00e-96	345.00
IUUC-Ppa-095514	Physcomitrella patens	48.23	6.00e-133	466.00
IUUC-Pfo-097432	Poecilia formosa	78.50	0.00e+00	738.00
IUUC-Pab-098423	Pongo abelii	96.18	0.00e+00	908.00
IUUC-Pop-099649	Populus trichocarpa	47.45	4.00e-130	457.00
IUUC-Pca-100365	Procavia capensis	88.99	0.00e+00	801.00
IUUC-Ppe-101379	Prunus persica	46.22	1.00e-126	446.00
IUUC-Pva-102845	Pteropus vampyrus	96.18	0.00e+00	898.00
IUUC-Pgr-103469	Puccinia graminis	32.09	1.00e-67	250.00
IUUC-Ptt-103980	Puccinia triticina	34.41	2.00e-61	229.00
IUUC-Pte-104111	Pyrenophora teres	42.32	2.00e-103	368.00
IUUC-Pyt-104610	Pyrenophora triticirepentis	42.63	2.00e-103	369.00
IUUC-Rno-105082	Rattus norvegicus	92.58	0.00e+00	883.00
IUUC-Sce-106340	Saccharomyces cerevisiae	45.40	4.00e-118	417.00
IUUC-Sha-106584	Sarcophilus harrisii	88.99	0.00e+00	848.00
IUUC-Sja-107703	Schizosaccharomyces japonicus	43.40	2.00e-102	365.00
IUUC-Spo-108046	Schizosaccharomyces pombe	45.31	1.00e-106	379.00
IUUC-Ssl-108574	Sclerotinia sclerotiorum	43.27	2.00e-106	379.00
IUUC-Smo-109548	Selaginella moellendorffii	46.65	9.00e-128	449.00
IUUC-Sit-110242	Setaria italica	47.12	8.00e-123	433.00
IUUC-Sly-111762	Solanum lycopersicum	46.90	2.00e-126	445.00
IUUC-Stu-112156	Solanum tuberosum	46.90	1.00e-126	446.00
IUUC-Sbi-114739	Sorghum bicolor	48.45	2.00e-125	442.00
IUUC-Sre-114951	Sporisorium reilianum	39.00	9.00e-104	370.00
IUUC-Tgu-117234	Taeniopygia guttata	87.68	0.00e+00	750.00
IUUC-Tru-117986	Takifugu rubripes	76.61	0.00e+00	753.00
IUUC-Tsy-119252	Tarsius syrichta	91.59	0.00e+00	820.00
IUUC-Tni-119785	Tetraodon nigroviridis	76.98	0.00e+00	717.00
IUUC-Tca-121222	Theobroma cacao	46.46	1.00e-125	442.00
IUUC-Tre-122243	Trichoderma reesei	43.18	1.00e-102	366.00
IUUC-Tvi-122293	Trichoderma virens	43.18	2.00e-101	362.00
IUUC-Tae-125191	Triticum aestivum	45.80	4.00e-117	414.00
IUUC-Tur-126098	Triticum urartu	44.73	2.00e-107	382.00
IUUC-Tme-127200	Tuber melanosporum	46.41	6.00e-122	430.00
IUUC-Tbe-127568	Tupaia belangeri	96.46	4.00e-134	470.00
IUUC-Ttr-129185	Tursiops truncatus	86.07	0.00e+00	790.00
IUUC-Uma-129353	Ustilago maydis	39.40	2.00e-103	369.00
IUUC-Vda-129768	Verticillium dahliae	41.81	4.00e-99	354.00
IUUC-Vpa-130572	Vicugna pacos	97.30	0.00e+00	917.00
IUUC-Vvi-131555	Vitis vinifera	47.12	3.00e-127	447.00
IUUC-Xtr-132263	Xenopus tropicalis	81.04	0.00e+00	642.00
IUUC-Xma-133925	Xiphophorus maculatus	78.74	0.00e+00	741.00
IUUC-Yli-134384	Yarrowia lipolytica	45.19	3.00e-114	404.00
IUUC-Zma-135616	Zea mays	48.23	4.00e-124	437.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence