iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000888

Ensembl Protein ID

EMT06098

UniProt Accession

M8BH83; M8BH83_AEGTA

Genbank Protein ID

EMT06098.1

Protein Name

LIM and UIM domain-containing

Genbank Nucleotide ID

KD582027

Gene Name

F775_08264

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_08264	EMT06098	EMT06098

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UIM	9.10e-08	32.0	59	75
UBD/Alpha-Helix/UIM	3.2e-05	13.0	31	46

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UIM

   S: 1    dEdeeLqlAlalSlqEe 17
           dEde+L++A+++Sl++e
   Q: 59   DEDEQLARAIQESLNVE 75
           7*************997 PP

UBD/Alpha-Helix/UIM

   S: 4    eeLqlAlalSlqEeee 19
           e++ +A+alSl Eee+
   Q: 31   EDIDRAIALSLLEEEH 46
           89************97 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MAAGLDKPDI PEMWCAIEAV DPDPLSEFDN EDIDRAIALS LLEEEHRKPK ETGKDLHLDE 60
DEQLARAIQE SLNVESPPRP HENASPPRPR ENSAHPRARE NGNANGGNSY QQLPFMFSSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGCTG GTCTTGACAA ACCAGATATC CCTGAGATGT GGTGTGCGAT AGAGGCAGTG 60
GACCCTGTCA GGCCCACTCC TTACGCGCTG CCCATGATAA CAATTCTTGC ACACCTGTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Interpro

IPR022087--DA1-like
IPR003903--UIM_dom
IPR001781--Znf_LIM

PROSITE

PS00478--LIM_DOMAIN_1
PS50023--LIM_DOMAIN_2
PS50330--UIM

Pfam

PF12315--DA1-like
PF00412--LIM

SMART

SM00132--LIM
SM00726--UIM

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

ats:F775_08264

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002465	Amborella trichopoda	73.98	0.00e+00	669.00
IUUC-Aly-005589	Arabidopsis lyrata	68.03	0.00e+00	626.00
IUUC-Ath-007530	Arabidopsis thaliana	70.93	1.00e-177	615.00
IUUC-Ame-011762	Astyanax mexicanus	23.61	1.00e-05	44.70
IUUC-Bci-013731	Botrytis cinerea	28.92	4.10e-02	32.00
IUUC-Bdi-014217	Brachypodium distachyon	90.78	0.00e+00	841.00
IUUC-Bol-015361	Brassica oleracea	70.28	2.00e-176	611.00
IUUC-Bra-016788	Brassica rapa	51.53	2.00e-96	344.00
IUUC-Cpo-021667	Cavia porcellus	37.66	3.00e-07	50.10
IUUC-Dre-027455	Danio rerio	22.92	2.00e-05	44.30
IUUC-Dse-031181	Dothistroma septosporum	37.50	7.00e-05	42.40
IUUC-Dme-031605	Drosophila melanogaster	27.21	1.00e-06	48.90
IUUC-Eeu-034622	Erinaceus europaeus	32.73	2.30e+00	25.80
IUUC-Fal-037626	Ficedula albicollis	38.96	2.00e-07	50.40
IUUC-Gga-040724	Gallus gallus	24.31	2.00e-05	44.30
IUUC-Gma-043003	Glycine max	61.98	2.00e-180	624.00
IUUC-Lpe-050858	Leersia perrieri	89.44	0.00e+00	792.00
IUUC-Loc-052468	Lepisosteus oculatus	23.61	1.00e-05	44.70
IUUC-Mpo-057455	Magnaporthe poae	30.61	4.00e-03	35.40
IUUC-Mtr-058103	Medicago truncatula	62.43	4.00e-175	607.00
IUUC-Mdo-062894	Monodelphis domestica	35.16	1.00e-03	37.00
IUUC-Mac-065516	Musa acuminata	59.29	8.00e-42	161.00
IUUC-Oba-075285	Oryza barthii	89.74	0.00e+00	791.00
IUUC-Obr-076433	Oryza brachyantha	85.36	0.00e+00	801.00
IUUC-Ogl-077044	Oryza glaberrima	89.74	0.00e+00	791.00
IUUC-Ogu-078868	Oryza glumaepatula	89.74	0.00e+00	791.00
IUUC-Oin-079737	Oryza indica	90.09	0.00e+00	793.00
IUUC-Olo-080337	Oryza longistaminata	90.46	0.00e+00	793.00
IUUC-Oni-082197	Oryza nivara	89.74	0.00e+00	791.00
IUUC-Opu-083815	Oryza punctata	88.37	0.00e+00	781.00
IUUC-Oru-085246	Oryza rufipogon	89.74	0.00e+00	791.00
IUUC-Osa-086082	Oryza sativa	89.74	0.00e+00	791.00
IUUC-Olu-087728	Ostreococcus lucimarinus	32.08	1.00e-50	193.00
IUUC-Ppa-096027	Physcomitrella patens	50.76	9.00e-130	456.00
IUUC-Pfo-097294	Poecilia formosa	38.96	3.00e-09	56.20
IUUC-Pab-098372	Pongo abelii	23.61	9.00e-05	42.00
IUUC-Pop-100076	Populus trichocarpa	68.47	0.00e+00	635.00
IUUC-Smo-108841	Selaginella moellendorffii	63.56	2.00e-134	471.00
IUUC-Sit-110147	Setaria italica	87.21	0.00e+00	800.00
IUUC-Sly-111689	Solanum lycopersicum	69.60	0.00e+00	648.00
IUUC-Stu-112186	Solanum tuberosum	70.46	0.00e+00	647.00
IUUC-Sbi-114752	Sorghum bicolor	87.37	0.00e+00	792.00
IUUC-Ssc-116398	Sus scrofa	23.61	9.00e-05	42.00
IUUC-Tgu-116824	Taeniopygia guttata	38.96	6.00e-07	48.50
IUUC-Tca-121863	Theobroma cacao	69.38	3.00e-176	610.00
IUUC-Tre-121981	Trichoderma reesei	35.00	3.00e-03	35.80
IUUC-Tvi-122320	Trichoderma virens	35.00	1.30e-02	33.50
IUUC-Tae-125566	Triticum aestivum	98.73	0.00e+00	887.00
IUUC-Tur-126006	Triticum urartu	92.01	0.00e+00	900.00
IUUC-Vda-129734	Verticillium dahliae	31.15	1.00e-01	30.80
IUUC-Vpa-130784	Vicugna pacos	38.96	2.00e-07	50.40
IUUC-Vvi-131286	Vitis vinifera	70.97	0.00e+00	647.00
IUUC-Xma-134125	Xiphophorus maculatus	38.96	2.00e-09	56.60
IUUC-Zma-135630	Zea mays	86.68	0.00e+00	796.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence