iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Hvu-047252

Ensembl Protein ID

MLOC_48639.2

UniProt Accession

F2E5C3; F2E5C3_HORVV

Genbank Protein ID

BAK02545.1

Protein Name

Predicted protein

Genbank Nucleotide ID

AK371347

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MLOC_48639	MLOC_48639.2	MLOC_48639.2
MLOC_48639	MLOC_48639.3	MLOC_48639.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	51.52	1.00e-59	226.00	IUUC-Ath-007424
E3 activity/RING/RING	26.39	3.00e-04	43.50	IUUC-Hsa-046704
E3 activity/RING/RING	34.25	2.00e-05	44.30	IUUC-Sce-106198

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Hordeum vulgare

Protein Sequence
(Fasta)

MSSAATKLAT AADATSAEAQ TLVLDMRKAL SSMKALAVEY ERAGKSDKVK QLEDAVQELV 60
ASYEECAYLA EAVKQVPGAY QPSDQATDFR KLIEGEVAKV KGTSRSSGHK DQLIRQFKEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTTCCCTCC ATTCCCCCGC GGAGAAAAAA AAGGGGAACC GCGGGAGTTC GCCGGAGATG 60
TCGTCGGCGG CGACGAAGCT CGCCACCGCG GCCGACGCCA CCTCGGCGGA GGCCCAAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR026846--Nse2(Mms21)
IPR004181--Znf_MIZ
IPR013083--Znf_RING/FYVE/PHD

Pfam

PF11789--zf-Nse

Gene Ontology

GO:0005634--C:nucleus
GO:0030915--C:Smc5-Smc6 complex
GO:0019789--F:SUMO transferase activity
GO:0008270--F:zinc ion binding
GO:0000724--P:double-strand break repair via homologous recombination
GO:0060250--P:germ-line stem-cell niche homeostasis
GO:0032876--P:negative regulation of DNA endoreduplication
GO:0008284--P:positive regulation of cell proliferation
GO:0080038--P:positive regulation of cytokinin-activated signaling pathway
GO:0045931--P:positive regulation of mitotic cell cycle
GO:0010082--P:regulation of root meristem growth

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000276	Aegilops tauschii	87.30	3.00e-100	356.00
IUUC-Atr-002438	Amborella trichopoda	44.07	3.00e-48	183.00
IUUC-Aca-004433	Anolis carolinensis	25.12	7.00e-07	46.20
IUUC-Aly-006133	Arabidopsis lyrata	46.35	2.00e-62	230.00
IUUC-Ath-007424	Arabidopsis thaliana	46.35	2.00e-63	234.00
IUUC-Ago-007852	Ashbya gossypii	26.19	3.00e-06	43.50
IUUC-Afl-008685	Aspergillus flavus	23.53	5.20e-01	26.60
IUUC-Ate-010326	Aspergillus terreus	31.25	4.80e-02	32.30
IUUC-Ame-010902	Astyanax mexicanus	31.91	2.00e-06	44.70
IUUC-Bgr-012088	Blumeria graminis	30.10	2.00e-05	42.40
IUUC-Bdi-014403	Brachypodium distachyon	64.98	4.00e-91	325.00
IUUC-Bol-015454	Brassica oleracea	42.86	9.00e-59	218.00
IUUC-Bra-017093	Brassica rapa	36.16	5.00e-46	176.00
IUUC-Cel-018588	Caenorhabditis elegans	30.91	2.00e-05	40.80
IUUC-Cre-022817	Chlamydomonas reinhardtii	33.33	4.80e-01	28.50
IUUC-Cne-026806	Cryptococcus neoformans	21.84	9.00e-05	39.70
IUUC-Cme-027175	Cyanidioschyzon merolae	31.65	5.00e-05	40.40
IUUC-Dre-028325	Danio rerio	25.93	6.00e-07	46.20
IUUC-Dse-031273	Dothistroma septosporum	29.87	1.00e-04	40.00
IUUC-Dme-031933	Drosophila melanogaster	30.91	6.00e-12	62.80
IUUC-Eca-034371	Equus caballus	28.95	8.00e-07	45.80
IUUC-Fox-037843	Fusarium oxysporum	27.69	3.00e-06	44.70
IUUC-Fso-038272	Fusarium solani	27.27	6.00e-06	43.90
IUUC-Ggr-040059	Gaeumannomyces graminis	29.58	4.00e-06	44.70
IUUC-Gga-040737	Gallus gallus	44.12	1.90e-02	31.60
IUUC-Gac-042591	Gasterosteus aculeatus	28.29	4.00e-08	50.10
IUUC-Gma-043177	Glycine max	47.66	9.00e-57	212.00
IUUC-Ggo-045206	Gorilla gorilla	31.03	2.00e-05	41.60
IUUC-Hsa-046704	Homo sapiens	31.03	2.00e-05	41.60
IUUC-Lpe-051150	Leersia perrieri	55.43	2.00e-81	293.00
IUUC-Loc-052687	Lepisosteus oculatus	24.28	1.00e-06	45.40
IUUC-Mor-057028	Magnaporthe oryzae	27.78	3.00e-06	45.10
IUUC-Mpo-057462	Magnaporthe poae	29.58	2.00e-05	42.40
IUUC-Mtr-058011	Medicago truncatula	39.37	2.00e-50	191.00
IUUC-Mdo-061863	Monodelphis domestica	28.08	3.00e-08	50.40
IUUC-Mac-065639	Musa acuminata	46.93	6.00e-56	209.00
IUUC-Nfi-068508	Neosartorya fischeri	32.79	1.10e-02	33.50
IUUC-Ont-071575	Oreochromis niloticus	31.03	1.00e-07	48.50
IUUC-Oba-075725	Oryza barthii	53.53	1.00e-72	264.00
IUUC-Obr-076506	Oryza brachyantha	54.08	2.00e-71	260.00
IUUC-Ogl-077564	Oryza glaberrima	61.63	3.00e-58	216.00
IUUC-Ogu-079018	Oryza glumaepatula	53.94	6.00e-73	265.00
IUUC-Oin-079792	Oryza indica	54.85	1.00e-74	271.00
IUUC-Olo-080864	Oryza longistaminata	51.96	2.00e-24	102.00
IUUC-Ome-081426	Oryza meridionalis	61.90	7.00e-72	261.00
IUUC-Oni-082286	Oryza nivara	53.94	4.00e-73	266.00
IUUC-Opu-083586	Oryza punctata	60.85	5.00e-70	255.00
IUUC-Oru-085158	Oryza rufipogon	53.94	4.00e-73	266.00
IUUC-Osa-085872	Oryza sativa	58.82	1.00e-23	100.00
IUUC-Olu-087903	Ostreococcus lucimarinus	34.12	2.00e-07	47.80
IUUC-Ptr-091582	Pan troglodytes	31.03	2.00e-05	41.60
IUUC-Pma-094198	Petromyzon marinus	27.20	1.00e-06	43.90
IUUC-Pno-094931	Phaeosphaeria nodorum	21.86	2.00e-05	42.40
IUUC-Ppa-095570	Physcomitrella patens	34.96	9.00e-41	158.00
IUUC-Pab-098005	Pongo abelii	31.03	2.00e-05	41.60
IUUC-Pop-099559	Populus trichocarpa	48.18	4.00e-63	233.00
IUUC-Ppe-101873	Prunus persica	45.91	9.00e-59	218.00
IUUC-Pte-104390	Pyrenophora teres	23.90	9.00e-06	43.50
IUUC-Pyt-104633	Pyrenophora triticirepentis	25.77	4.00e-04	38.10
IUUC-Rno-105346	Rattus norvegicus	25.93	4.00e-04	37.00
IUUC-Sce-106198	Saccharomyces cerevisiae	34.25	3.00e-06	44.30
IUUC-Sja-107983	Schizosaccharomyces japonicus	28.36	5.00e-09	53.50
IUUC-Spo-108327	Schizosaccharomyces pombe	32.41	2.00e-09	55.10
IUUC-Smo-109438	Selaginella moellendorffii	40.83	5.00e-37	145.00
IUUC-Sit-109919	Setaria italica	61.37	2.00e-88	317.00
IUUC-Sly-111667	Solanum lycopersicum	43.78	2.00e-60	223.00
IUUC-Stu-112211	Solanum tuberosum	43.97	2.00e-59	220.00
IUUC-Sbi-113916	Sorghum bicolor	61.80	2.00e-89	320.00
IUUC-Sre-115187	Sporisorium reilianum	25.79	3.00e-07	47.80
IUUC-Tgu-116472	Taeniopygia guttata	28.21	3.00e-05	40.80
IUUC-Tru-117771	Takifugu rubripes	37.88	2.00e-05	41.60
IUUC-Tni-119821	Tetraodon nigroviridis	36.46	1.00e-09	55.50
IUUC-Tca-121272	Theobroma cacao	48.48	2.00e-58	217.00
IUUC-Tre-122049	Trichoderma reesei	33.78	6.00e-07	47.40
IUUC-Tvi-122642	Trichoderma virens	29.73	2.00e-06	45.40
IUUC-Tae-122969	Triticum aestivum	87.27	1.00e-116	410.00
IUUC-Tur-126346	Triticum urartu	85.71	3.00e-98	349.00
IUUC-Tme-126988	Tuber melanosporum	25.64	6.00e-07	47.00
IUUC-Tbe-127676	Tupaia belangeri	35.29	2.00e-04	37.40
IUUC-Ttr-128602	Tursiops truncatus	28.89	6.00e-05	39.70
IUUC-Vvi-131486	Vitis vinifera	50.75	8.00e-60	221.00
IUUC-Yli-134676	Yarrowia lipolytica	40.00	2.00e-06	45.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence