iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048037

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01099960

Gene Name

RNF5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000024478.1	ENSSTOT00000020845.1	ENSSTOP00000021545.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.50e-07	31.1	27	68

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCle  ++  +v  CgH+++  Cl++w         ++ CP+C+
   Q: 27   CNICLETARE-AVVSVCGHLYCWPCLHQW---LETRPERQECPVCK 68
           99******88.888***************...555888889****7 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MAAAEEEDGG PEGPNRDRGG AGATFECNIC LETAREAVVS VCGHLYCWPC LHQWLETRPE 60
RQECPVCKAG ISREKVVPLY GRGSQKPQDP RLKTPPRPQG QRPAPESRGG FQPFGDTGGF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGTGTGTGT TTAGGGGGAC TGAGGGGTGC GCGGGGGCGA AACAGAACCG GCCATGGCAG 60
CAGCAGAAGA GGAGGACGGG GGCCCCGAAG GGCCAAACCG CGATCGGGGC GGGGCGGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0010507--P:negative regulation of autophagy
GO:0031648--P:protein destabilization
GO:0070936--P:protein K48-linked ubiquitination
GO:0070534--P:protein K63-linked ubiquitination
GO:2000785--P:regulation of autophagosome assembly
GO:0009617--P:response to bacterium

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001155	Aegilops tauschii	48.54	9.00e-24	103.00
IUUC-Aml-001417	Ailuropoda melanoleuca	97.64	1.00e-70	258.00
IUUC-Aca-004254	Anolis carolinensis	77.01	1.00e-36	145.00
IUUC-Ame-011316	Astyanax mexicanus	70.78	5.00e-57	213.00
IUUC-Bta-013109	Bos taurus	97.87	2.00e-79	287.00
IUUC-Bdi-014313	Brachypodium distachyon	54.65	1.00e-23	102.00
IUUC-Bol-016132	Brassica oleracea	39.26	4.00e-27	114.00
IUUC-Bra-017631	Brassica rapa	38.79	8.00e-27	113.00
IUUC-Cja-019902	Callithrix jacchus	97.16	1.00e-78	285.00
IUUC-Cfa-020079	Canis familiaris	97.16	1.00e-78	285.00
IUUC-Cpo-021320	Cavia porcellus	93.41	1.00e-87	314.00
IUUC-Csa-023595	Chlorocebus sabaeus	98.58	9.00e-80	288.00
IUUC-Cme-027164	Cyanidioschyzon merolae	32.24	7.00e-17	80.50
IUUC-Dre-027716	Danio rerio	74.29	1.00e-42	165.00
IUUC-Dno-029843	Dasypus novemcinctus	85.11	3.00e-56	210.00
IUUC-Dor-030170	Dipodomys ordii	97.58	3.00e-69	253.00
IUUC-Eca-033642	Equus caballus	97.56	1.00e-91	328.00
IUUC-Eeu-034778	Erinaceus europaeus	98.29	4.00e-64	236.00
IUUC-Fca-036326	Felis catus	95.74	4.00e-78	283.00
IUUC-Fso-038195	Fusarium solani	41.67	1.00e-10	60.50
IUUC-Gac-042258	Gasterosteus aculeatus	80.80	2.00e-56	211.00
IUUC-Ggo-045474	Gorilla gorilla	99.29	4.00e-80	290.00
IUUC-Hsa-046046	Homo sapiens	99.29	3.00e-80	290.00
IUUC-Hvu-047043	Hordeum vulgare	54.02	2.00e-23	102.00
IUUC-Lch-050367	Latimeria chalumnae	72.73	5.00e-46	176.00
IUUC-Lpe-051034	Leersia perrieri	45.26	1.00e-25	109.00
IUUC-Laf-053395	Loxodonta africana	97.16	1.00e-78	285.00
IUUC-Mcc-054833	Macaca mulatta	98.58	9.00e-80	288.00
IUUC-Meu-055984	Macropus eugenii	87.34	1.00e-36	145.00
IUUC-Mdo-062437	Monodelphis domestica	89.02	1.00e-83	301.00
IUUC-Mmu-064159	Mus musculus	98.59	2.00e-80	290.00
IUUC-Mac-065053	Musa acuminata	57.65	7.00e-24	103.00
IUUC-Mlu-067689	Myotis lucifugus	92.59	3.00e-84	303.00
IUUC-Nle-069705	Nomascus leucogenys	99.29	3.00e-80	290.00
IUUC-Opr-070392	Ochotona princeps	77.97	2.00e-20	90.50
IUUC-Ont-072482	Oreochromis niloticus	74.83	7.00e-59	219.00
IUUC-Ocu-074208	Oryctolagus cuniculus	97.87	6.00e-79	285.00
IUUC-Oba-075461	Oryza barthii	52.75	3.00e-24	105.00
IUUC-Obr-076382	Oryza brachyantha	56.98	6.00e-25	107.00
IUUC-Ogl-077553	Oryza glaberrima	52.29	9.00e-27	112.00
IUUC-Ogu-078463	Oryza glumaepatula	52.29	8.00e-27	113.00
IUUC-Oin-080177	Oryza indica	52.29	1.00e-26	112.00
IUUC-Olo-080653	Oryza longistaminata	49.07	9.00e-25	106.00
IUUC-Ome-081605	Oryza meridionalis	52.29	1.00e-26	112.00
IUUC-Oni-082458	Oryza nivara	52.29	2.00e-26	112.00
IUUC-Opu-083362	Oryza punctata	58.14	1.00e-25	110.00
IUUC-Oru-084757	Oryza rufipogon	51.33	3.00e-27	114.00
IUUC-Osa-086198	Oryza sativa	51.33	3.00e-27	115.00
IUUC-Ola-086507	Oryzias latipes	72.50	7.00e-62	229.00
IUUC-Olu-087623	Ostreococcus lucimarinus	48.53	1.00e-16	79.00
IUUC-Oga-088912	Otolemur garnettii	98.58	8.00e-80	288.00
IUUC-Oar-090284	Ovis aries	94.63	4.00e-71	259.00
IUUC-Ptr-090919	Pan troglodytes	99.21	8.00e-71	258.00
IUUC-Pan-092843	Papio anubis	98.58	9.00e-80	288.00
IUUC-Pfo-096818	Poecilia formosa	80.16	3.00e-57	214.00
IUUC-Pab-098244	Pongo abelii	98.58	8.00e-80	288.00
IUUC-Pop-099595	Populus trichocarpa	43.54	1.00e-27	115.00
IUUC-Pca-100319	Procavia capensis	95.73	8.00e-82	295.00
IUUC-Pva-102249	Pteropus vampyrus	93.62	5.00e-73	266.00
IUUC-Rno-106042	Rattus norvegicus	98.59	2.00e-80	290.00
IUUC-Smo-109079	Selaginella moellendorffii	48.19	2.00e-22	100.00
IUUC-Sit-109934	Setaria italica	54.65	2.00e-23	102.00
IUUC-Sly-110917	Solanum lycopersicum	49.46	2.00e-25	108.00
IUUC-Stu-112552	Solanum tuberosum	49.46	2.00e-25	108.00
IUUC-Sbi-114275	Sorghum bicolor	54.65	2.00e-23	102.00
IUUC-Ssc-115934	Sus scrofa	98.58	8.00e-80	288.00
IUUC-Tru-118679	Takifugu rubripes	61.73	2.00e-23	100.00
IUUC-Tsy-119615	Tarsius syrichta	95.07	3.00e-75	273.00
IUUC-Tca-121830	Theobroma cacao	48.78	1.00e-25	108.00
IUUC-Tae-124319	Triticum aestivum	54.65	2.00e-23	102.00
IUUC-Tur-126198	Triticum urartu	54.65	1.00e-23	102.00
IUUC-Tbe-127773	Tupaia belangeri	95.74	5.00e-76	276.00
IUUC-Ttr-128690	Tursiops truncatus	96.58	2.00e-63	234.00
IUUC-Vvi-131225	Vitis vinifera	60.00	5.00e-26	110.00
IUUC-Xtr-132608	Xenopus tropicalis	80.00	2.00e-45	174.00
IUUC-Xma-134225	Xiphophorus maculatus	80.16	2.00e-57	214.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence