iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058782

Ensembl Protein ID

AES92430

UniProt Accession

G7JEB6; A0A0C3X856; G7JEB6_MEDTR

Genbank Protein ID

AES92430.2

Protein Name

RING-H2 finger protein ATL13, putative

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g129420

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g129420	AES92430	AES92430

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.10e-06	27.7	144	186

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  +d +++lp C H+fh +C+  w         + +CPlCr
   Q: 144  CAVCLCEFehEDKLRLLPkCSHAFHMECIDTW------LLSHSTCPLCR 186
           ********775559******************......89999*****8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MGRSFEPFQG DNTFMIPSPL EQPPYYFQPH PPFPPITVST LRSNNNSNFS FNNSTLKVSP 60
GILIIITILA IVFFISGLLH LLVRFLWRPQ SRDPDELDDV TALQGQLQQL FHLHDAGVDQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTCACTCAC TCTTCCCACC TTACAGGCTC AAATCAAATC TACAAAACTG TTGTAATAAA 60
ACAAAACACA ATCCAGGTAC ACAAATTTCT CCAAAACCAA ACTCCTGTTC CTTACATCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_4g129420

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000746	Aegilops tauschii	35.10	3.00e-35	141.00
IUUC-Atr-002500	Amborella trichopoda	49.02	2.00e-93	335.00
IUUC-Aly-006179	Arabidopsis lyrata	49.56	1.00e-83	302.00
IUUC-Ath-006858	Arabidopsis thaliana	49.01	4.00e-86	311.00
IUUC-Ago-007872	Ashbya gossypii	33.05	3.00e-12	63.50
IUUC-Bdi-014934	Brachypodium distachyon	69.03	3.00e-47	182.00
IUUC-Bol-016576	Brassica oleracea	45.05	1.00e-72	265.00
IUUC-Bra-017063	Brassica rapa	47.32	7.00e-78	283.00
IUUC-Gma-043592	Glycine max	69.71	2.00e-167	581.00
IUUC-Hvu-047745	Hordeum vulgare	39.40	1.00e-54	206.00
IUUC-Lpe-051680	Leersia perrieri	43.72	1.00e-70	259.00
IUUC-Mac-064639	Musa acuminata	48.34	9.00e-91	326.00
IUUC-Opr-070704	Ochotona princeps	49.09	1.00e-13	68.90
IUUC-Oba-075403	Oryza barthii	42.26	1.00e-70	259.00
IUUC-Obr-076503	Oryza brachyantha	43.51	5.00e-67	247.00
IUUC-Ogl-077574	Oryza glaberrima	42.35	8.00e-71	260.00
IUUC-Ogu-077986	Oryza glumaepatula	42.35	8.00e-71	260.00
IUUC-Oin-079091	Oryza indica	42.56	1.00e-71	263.00
IUUC-Olo-080854	Oryza longistaminata	42.57	1.00e-45	176.00
IUUC-Ome-081627	Oryza meridionalis	44.68	1.00e-68	253.00
IUUC-Oni-082260	Oryza nivara	42.35	7.00e-71	260.00
IUUC-Opu-083578	Oryza punctata	43.37	4.00e-70	258.00
IUUC-Oru-084794	Oryza rufipogon	42.35	8.00e-71	260.00
IUUC-Osa-085348	Oryza sativa	42.14	8.00e-71	260.00
IUUC-Ppa-095806	Physcomitrella patens	67.24	3.00e-40	159.00
IUUC-Pop-099449	Populus trichocarpa	59.44	9.00e-141	492.00
IUUC-Ppe-101557	Prunus persica	66.67	1.00e-140	492.00
IUUC-Pgr-103263	Puccinia graminis	45.45	2.00e-12	67.40
IUUC-Smo-109112	Selaginella moellendorffii	73.53	1.00e-27	113.00
IUUC-Sit-109852	Setaria italica	43.81	7.00e-68	250.00
IUUC-Sly-111133	Solanum lycopersicum	52.40	2.00e-109	388.00
IUUC-Stu-112868	Solanum tuberosum	53.17	3.00e-109	388.00
IUUC-Sbi-114435	Sorghum bicolor	43.61	6.00e-69	254.00
IUUC-Tca-121042	Theobroma cacao	66.45	2.00e-135	475.00
IUUC-Tae-124510	Triticum aestivum	40.14	4.00e-58	218.00
IUUC-Tur-126047	Triticum urartu	41.30	2.00e-51	195.00
IUUC-Vvi-130906	Vitis vinifera	64.59	3.00e-137	481.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence