iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ont-071701

Ensembl Protein ID

ENSONIP00000024196.1

UniProt Accession

I3KSV0; I3KSV0_ORENI

Genbank Protein ID

ENSONIP00000024196

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AERX01006798

Gene Name

kdm5ba; LOC100712531

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000019223.1	ENSONIT00000024217.1	ENSONIP00000024196.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.60e-21	76.6	289	334

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkC 51
           +ClvCg+g++++  l+ C+ C++ +H  Cl ++   ++p+ + w Cp+C
   Q: 289  MCLVCGSGSAED-RLLLCDGCDDSYHIFCLIPP-LHDVPKGD-WRCPRC 334
           9*********88.5*******************.*******7.****** PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MTQPQVNEFI PPPECPVFEP SWEEFADPFA YINKIRPIAE KTGICKIRPP PDWQPPFACD 60
VDRLKFTPRI QRLNELEAQT RVKLNFLDQI AKFWELQGCK LKIPQVERKI LDLYQLNKLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATTATTATA AATTTGGCGT CAAACAAATG AAATTGACTC AATGAAAATG TTTATTTTAA 60
AAACGCAAAC GGCTGAACTA TCAACATATG ACTCCTCTCT GCCAATCAAC GAGCTTCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003770	Anas platyrhynchos	67.45	0.00e+00	1677.00
IUUC-Bdi-014050	Brachypodium distachyon	30.98	1.00e-121	432.00
IUUC-Dre-028118	Danio rerio	67.07	0.00e+00	1944.00
IUUC-Eeu-035012	Erinaceus europaeus	56.85	0.00e+00	1306.00
IUUC-Gac-041461	Gasterosteus aculeatus	83.45	0.00e+00	2551.00
IUUC-Gma-042675	Glycine max	31.30	9.00e-114	405.00
IUUC-Lch-050483	Latimeria chalumnae	58.52	0.00e+00	1727.00
IUUC-Oba-075388	Oryza barthii	32.38	4.00e-84	307.00
IUUC-Obr-076296	Oryza brachyantha	32.89	1.00e-92	336.00
IUUC-Ogu-079040	Oryza glumaepatula	28.33	1.00e-83	305.00
IUUC-Ome-081764	Oryza meridionalis	34.97	1.00e-101	365.00
IUUC-Oni-083012	Oryza nivara	31.87	4.00e-83	304.00
IUUC-Oru-084630	Oryza rufipogon	31.74	5.00e-83	303.00
IUUC-Ola-086542	Oryzias latipes	84.45	0.00e+00	1943.00
IUUC-Pfo-096777	Poecilia formosa	85.33	0.00e+00	2551.00
IUUC-Ppe-101504	Prunus persica	32.62	6.00e-101	363.00
IUUC-Pva-103035	Pteropus vampyrus	61.74	0.00e+00	1574.00
IUUC-Pgr-103434	Puccinia graminis	34.48	3.00e-30	126.00
IUUC-Sja-107970	Schizosaccharomyces japonicus	20.83	5.00e-45	177.00
IUUC-Sit-110534	Setaria italica	35.46	6.00e-115	409.00
IUUC-Sbi-114173	Sorghum bicolor	62.79	4.00e-12	65.90
IUUC-Tru-117561	Takifugu rubripes	77.79	0.00e+00	2323.00
IUUC-Tni-119650	Tetraodon nigroviridis	78.78	0.00e+00	2334.00
IUUC-Tca-121478	Theobroma cacao	33.55	8.00e-108	386.00
IUUC-Tae-125894	Triticum aestivum	30.70	2.00e-113	405.00
IUUC-Tur-126632	Triticum urartu	33.63	3.00e-96	347.00
IUUC-Xtr-132008	Xenopus tropicalis	60.34	0.00e+00	1769.00
IUUC-Xma-133598	Xiphophorus maculatus	85.11	0.00e+00	2555.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence