iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sha-107394

Ensembl Protein ID

ENSSHAP00000019608.1

UniProt Accession

G3WW03; G3WW03_SARHA

Genbank Protein ID

ENSSHAP00000019608

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01128439

Gene Name

LAMP1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000016646.1	ENSSHAT00000019765.1	ENSSHAP00000019608.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	30.77	3.90e-02	34.30	IUUC-Sce-106188

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

LSTGLIHVAS SIFVVENGTK TACIMANFSA AFIMNYTTKG GFLNTSFDLP QNAAVLNSSS 60
CGQENASNPV LVIGFGAGHT LTMNFTRTSK SYQVQLLSFA FNLSDKDLFP NASATSKEMS 120

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Nucleotide Sequence
(Fasta)

TTGTCAACAG GACTCATACA TGTTGCATCT TCAATATTTG TGGTGGAAAA TGGCACTAAA 60
ACTGCATGCA TAATGGCTAA CTTCTCAGCT GCCTTTATTA TGAACTACAC CACTAAGGGT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1015--Disulfide bond
KW-0458--Lysosome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR018134--LAMP_CS
IPR002000--Lysosome-assoc_membr_glycop

PROSITE

PS00310--LAMP_1
PS00311--LAMP_2
PS51407--LAMP_3

Pfam

PF01299--Lamp

PRINTS

PR00336--LYSASSOCTDMP

Gene Ontology

GO:0044754--C:autolysosome
GO:0044194--C:cytolytic granule
GO:0005829--C:cytosol
GO:0009897--C:external side of plasma membrane
GO:0070062--C:extracellular exosome
GO:0016021--C:integral component of membrane
GO:0042470--C:melanosome
GO:0005771--C:multivesicular body
GO:0048471--C:perinuclear region of cytoplasm
GO:0061474--C:phagolysosome membrane
GO:0042383--C:sarcolemma
GO:0008021--C:synaptic vesicle
GO:0072594--P:establishment of protein localization to organelle
GO:0090160--P:Golgi to lysosome transport
GO:0008626--P:granzyme-mediated apoptotic signaling pathway
GO:0043323--P:positive regulation of natural killer cell degranulation
GO:0050821--P:protein stabilization
GO:1902513--P:regulation of organelle transport along microtubule

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000226	Aegilops tauschii	40.54	6.80e-01	27.70
IUUC-Hvu-047078	Hordeum vulgare	40.54	5.00e-01	28.10
IUUC-Pte-104250	Pyrenophora teres	24.62	3.10e+00	26.60
IUUC-Sce-106188	Saccharomyces cerevisiae	30.77	2.30e-02	34.30
IUUC-Tae-124129	Triticum aestivum	40.54	6.20e-01	28.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence