iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049846

Ensembl Protein ID

ENSLACP00000007599.1

UniProt Accession

H3AD78; H3AD78_LATCH

Genbank Protein ID

ENSLACP00000007599

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01232447

Gene Name

RNF170

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000006734.1	ENSLACT00000007663.1	ENSLACP00000007599.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.50e-06	26.3	3	46

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskef....rCPlCr 46
           C++Cl+     p+ ++CgH+f+  C+   w      +++++    +CP+Cr
   Q: 3    CPVCLQQATF-PVETNCGHLFCGPCIiAYW------TYGSWlgaiSCPICR 46
           *****98766.999***********97777......7777733336****8 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MSCPVCLQQA TFPVETNCGH LFCGPCIIAY WTYGSWLGAI SCPICRQTVT LLFPLFQEES 60
QQQDEQQDAR EILRNVNDYN RRFSGQPRSL MDRIMDLPTL LRHAFREMFS VGGLFWMFRI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTTCATGG TGTGGACAGC AGAAGTATTT TTAAATTGCT GTGAAAGACT GCTGCGCAAG 60
ACTTGGTACA GAGAGGAAGA ACTCCCTTTC CTTTGACGTG TTGAATTACG AACTACTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR010652--DUF1232
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF06803--DUF1232
PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000837	Aegilops tauschii	34.86	6.00e-22	97.10
IUUC-Aml-002276	Ailuropoda melanoleuca	82.02	4.00e-66	244.00
IUUC-Atr-003163	Amborella trichopoda	39.08	1.00e-26	112.00
IUUC-Apl-003771	Anas platyrhynchos	78.09	3.00e-60	224.00
IUUC-Aca-004706	Anolis carolinensis	83.71	2.00e-64	238.00
IUUC-Aly-006202	Arabidopsis lyrata	39.81	2.00e-18	84.70
IUUC-Ath-007325	Arabidopsis thaliana	36.26	6.00e-25	106.00
IUUC-Ame-011453	Astyanax mexicanus	79.89	6.00e-72	263.00
IUUC-Bta-013272	Bos taurus	79.78	1.00e-65	242.00
IUUC-Bdi-014259	Brachypodium distachyon	35.06	3.00e-23	101.00
IUUC-Bol-016302	Brassica oleracea	36.26	4.00e-25	107.00
IUUC-Bra-017738	Brassica rapa	36.26	1.00e-24	105.00
IUUC-Cel-018593	Caenorhabditis elegans	33.52	2.00e-24	105.00
IUUC-Cja-019253	Callithrix jacchus	78.45	4.00e-66	244.00
IUUC-Cfa-020844	Canis familiaris	80.79	7.00e-65	241.00
IUUC-Cpo-021645	Cavia porcellus	79.78	2.00e-65	241.00
IUUC-Csa-024012	Chlorocebus sabaeus	78.45	2.00e-65	242.00
IUUC-Cho-024304	Choloepus hoffmanni	53.59	9.00e-36	143.00
IUUC-Cin-025256	Ciona intestinalis	58.05	8.00e-46	176.00
IUUC-Dre-028166	Danio rerio	77.09	2.00e-67	248.00
IUUC-Dno-029494	Dasypus novemcinctus	81.46	2.00e-66	245.00
IUUC-Dor-030259	Dipodomys ordii	77.90	3.00e-64	238.00
IUUC-Ete-032614	Echinops telfairi	66.85	8.00e-49	186.00
IUUC-Eca-033557	Equus caballus	80.90	5.00e-66	243.00
IUUC-Eeu-035324	Erinaceus europaeus	89.89	2.00e-27	116.00
IUUC-Fca-035812	Felis catus	80.90	3.00e-66	244.00
IUUC-Fal-036654	Ficedula albicollis	84.83	1.00e-70	259.00
IUUC-Gmo-039635	Gadus morhua	77.78	3.00e-71	261.00
IUUC-Gga-040345	Gallus gallus	84.83	9.00e-71	259.00
IUUC-Gac-041668	Gasterosteus aculeatus	78.89	5.00e-72	263.00
IUUC-Gma-043890	Glycine max	33.91	2.00e-24	105.00
IUUC-Ggo-045000	Gorilla gorilla	78.45	2.00e-65	242.00
IUUC-Hsa-046691	Homo sapiens	79.01	1.00e-65	243.00
IUUC-Hvu-047464	Hordeum vulgare	35.63	4.00e-23	100.00
IUUC-Itr-048988	Ictidomys tridecemlineatus	78.45	5.00e-65	240.00
IUUC-Loc-051785	Lepisosteus oculatus	83.24	2.00e-81	295.00
IUUC-Laf-054542	Loxodonta africana	78.65	7.00e-65	239.00
IUUC-Mcc-055234	Macaca mulatta	78.45	2.00e-65	242.00
IUUC-Meu-056544	Macropus eugenii	60.67	1.00e-38	152.00
IUUC-Mtr-057996	Medicago truncatula	31.98	9.00e-14	69.70
IUUC-Mmr-060609	Microcebus murinus	79.21	2.00e-64	238.00
IUUC-Mdo-062853	Monodelphis domestica	81.46	1.00e-67	249.00
IUUC-Mmu-064383	Mus musculus	78.45	1.00e-64	239.00
IUUC-Mac-065250	Musa acuminata	37.93	3.00e-26	110.00
IUUC-Mlu-067410	Myotis lucifugus	81.46	3.00e-67	248.00
IUUC-Nle-069537	Nomascus leucogenys	79.01	1.00e-64	238.00
IUUC-Opr-070637	Ochotona princeps	79.74	4.00e-50	191.00
IUUC-Ont-071800	Oreochromis niloticus	78.89	2.00e-72	265.00
IUUC-Oan-073190	Ornithorhynchus anatinus	82.02	9.00e-67	246.00
IUUC-Ocu-073899	Oryctolagus cuniculus	78.45	2.00e-65	242.00
IUUC-Obr-076075	Oryza brachyantha	38.13	1.00e-22	99.40
IUUC-Oin-079850	Oryza indica	38.30	2.00e-22	98.60
IUUC-Ome-081191	Oryza meridionalis	38.30	7.00e-22	96.70
IUUC-Oni-082886	Oryza nivara	38.30	2.00e-22	98.60
IUUC-Osa-085833	Oryza sativa	38.30	2.00e-22	98.60
IUUC-Ola-086372	Oryzias latipes	79.44	2.00e-72	265.00
IUUC-Oga-087988	Otolemur garnettii	80.90	2.00e-65	241.00
IUUC-Oar-089976	Ovis aries	79.78	2.00e-65	241.00
IUUC-Ptr-091377	Pan troglodytes	77.90	2.00e-65	241.00
IUUC-Pan-092348	Papio anubis	78.45	1.00e-65	242.00
IUUC-Psi-092982	Pelodiscus sinensis	80.90	1.00e-64	239.00
IUUC-Ppa-095627	Physcomitrella patens	38.60	1.00e-20	93.20
IUUC-Pfo-096366	Poecilia formosa	78.33	1.00e-71	262.00
IUUC-Pab-098242	Pongo abelii	78.45	6.00e-65	239.00
IUUC-Pop-099776	Populus trichocarpa	36.21	2.00e-20	91.70
IUUC-Pca-100637	Procavia capensis	89.89	2.00e-27	115.00
IUUC-Ppe-101586	Prunus persica	37.31	8.00e-15	72.40
IUUC-Pva-102627	Pteropus vampyrus	82.58	5.00e-67	247.00
IUUC-Rno-105344	Rattus norvegicus	77.35	2.00e-67	248.00
IUUC-Sha-107420	Sarcophilus harrisii	80.90	3.00e-67	248.00
IUUC-Smo-109218	Selaginella moellendorffii	33.91	1.00e-24	105.00
IUUC-Sly-111612	Solanum lycopersicum	37.41	2.00e-17	83.20
IUUC-Stu-112127	Solanum tuberosum	36.84	3.00e-21	94.70
IUUC-Sar-113762	Sorex araneus	79.01	3.00e-66	244.00
IUUC-Sbi-113997	Sorghum bicolor	37.36	2.00e-23	102.00
IUUC-Ssc-115764	Sus scrofa	90.91	1.00e-27	113.00
IUUC-Tgu-116969	Taeniopygia guttata	84.83	8.00e-71	259.00
IUUC-Tru-118414	Takifugu rubripes	80.77	4.00e-69	254.00
IUUC-Tsy-119312	Tarsius syrichta	77.35	1.00e-64	239.00
IUUC-Tni-120687	Tetraodon nigroviridis	80.79	2.00e-69	254.00
IUUC-Tca-121028	Theobroma cacao	38.51	2.00e-18	85.10
IUUC-Tae-122873	Triticum aestivum	38.03	1.00e-22	98.60
IUUC-Tur-126558	Triticum urartu	34.64	1.00e-16	79.00
IUUC-Tbe-127751	Tupaia belangeri	66.29	2.00e-45	176.00
IUUC-Ttr-128731	Tursiops truncatus	72.47	2.00e-60	225.00
IUUC-Vpa-130187	Vicugna pacos	79.21	3.00e-65	241.00
IUUC-Vvi-131393	Vitis vinifera	37.93	4.00e-22	97.40
IUUC-Xtr-132512	Xenopus tropicalis	81.46	3.00e-70	257.00
IUUC-Xma-133203	Xiphophorus maculatus	78.89	4.00e-72	264.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence