iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017582

Ensembl Protein ID

Bra028184.1-P

UniProt Accession

M4EHB9; M4EHB9_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra028184	Bra028184.1	Bra028184.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	7.90e-24	84.1	151	192
ULD/UDP/UBQ/UBQ_PIM	1.80e-24	86.5	1	77

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           +e+ ++q+ +MG   +dr+++++aLraa+nn+e+AveyL++g
   Q: 151  LESTVQQILDMGggsWDRDTVVRALRAAFNNPERAVEYLYSG 192
           6899***********************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg..vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mk++vktlkg++fe+ev++ dt+++ K +i++++g  +p++qq LI++Gk+LkD+ttL+e+++ ++s+++++++k+k
   Q: 1    MKIFVKTLKGTNFEIEVNPADTISDTKRRIETHQGaqYPAAQQMLIHQGKVLKDETTLEENNVVENSFIVIMLSKAK 77
           99************************************************************************986 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MKIFVKTLKG TNFEIEVNPA DTISDTKRRI ETHQGAQYPA AQQMLIHQGK VLKDETTLEE 60
NNVVENSFIV IMLSKAKVSS SGASTASAPA PAPQAQPAQT VATPQVAAPT VSVPEPTSVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGATCT TCGTCAAGAC TCTCAAGGGG ACCAACTTCG AGATCGAAGT GAATCCGGCG 60
GATACGGTAA CCCTAATTCC CCAATTCGAG ATTCTCTCGC GTTATCTGCT TATTAGGTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	66.26	1.00e-81	296.00
IUUC-Aly-005486	Arabidopsis lyrata	85.79	3.00e-151	527.00
IUUC-Ath-006688	Arabidopsis thaliana	82.94	5.00e-139	486.00
IUUC-Bgr-012056	Blumeria graminis	36.45	1.00e-33	136.00
IUUC-Bta-012922	Bos taurus	38.31	1.00e-31	130.00
IUUC-Bdi-014452	Brachypodium distachyon	60.77	6.00e-108	383.00
IUUC-Bol-016493	Brassica oleracea	99.47	2.00e-152	531.00
IUUC-Dno-029543	Dasypus novemcinctus	39.11	1.00e-32	133.00
IUUC-Dse-031336	Dothistroma septosporum	38.17	1.00e-26	113.00
IUUC-Fca-035679	Felis catus	38.06	2.00e-31	129.00
IUUC-Hvu-047832	Hordeum vulgare	65.18	4.00e-84	304.00
IUUC-Lch-050553	Latimeria chalumnae	40.83	5.00e-29	121.00
IUUC-Lpe-051087	Leersia perrieri	67.87	1.00e-88	319.00
IUUC-Mmu-063258	Mus musculus	37.35	7.00e-33	134.00
IUUC-Nle-069655	Nomascus leucogenys	38.80	4.00e-32	132.00
IUUC-Oba-075392	Oryza barthii	65.46	3.00e-85	308.00
IUUC-Ogu-078883	Oryza glumaepatula	65.46	2.00e-85	309.00
IUUC-Oin-079817	Oryza indica	65.06	4.00e-85	308.00
IUUC-Olo-080929	Oryza longistaminata	65.06	5.00e-85	307.00
IUUC-Ome-081866	Oryza meridionalis	65.46	1.00e-85	309.00
IUUC-Oni-083092	Oryza nivara	65.06	4.00e-85	308.00
IUUC-Opu-083756	Oryza punctata	66.67	2.00e-87	315.00
IUUC-Oru-084816	Oryza rufipogon	65.06	4.00e-85	308.00
IUUC-Osa-086112	Oryza sativa	65.06	4.00e-85	308.00
IUUC-Oga-088023	Otolemur garnettii	39.04	1.00e-31	130.00
IUUC-Ppa-095654	Physcomitrella patens	59.06	9.00e-102	363.00
IUUC-Pfo-097385	Poecilia formosa	36.76	1.00e-36	147.00
IUUC-Rno-104844	Rattus norvegicus	37.50	4.00e-33	135.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	35.99	2.00e-42	166.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	44.00	2.00e-18	86.30
IUUC-Sit-110235	Setaria italica	66.00	2.00e-78	285.00
IUUC-Ssc-116329	Sus scrofa	38.31	1.00e-31	130.00
IUUC-Tru-117920	Takifugu rubripes	44.05	2.00e-41	162.00
IUUC-Tae-125207	Triticum aestivum	66.26	8.00e-83	300.00
IUUC-Tur-126610	Triticum urartu	65.84	7.00e-82	298.00
IUUC-Uma-129484	Ustilago maydis	50.85	1.00e-11	63.90
IUUC-Vpa-130357	Vicugna pacos	34.11	4.00e-17	82.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence