iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099224

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000345

Gene Name

POPTRDRAFT_650010; POPTR_0009s06310g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0009s06310	POPTR_0009s06310.1	POPTR_0009s06310.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-63	207.5	398	436
UBD/Beta-Prp	4.90e-74	250.3	98	295

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH ++v+ +++  d +ll+sGs D t+k+WD+rt++l +
   Q: 398  GHVGPVYQISWsADsRLLLSGSKDSTLKIWDIRTQKLKQ 436
           8***********555*******************99876 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetls 134
           + +++ gh ++v +v fspdg  l++gs D t+++wdl+t +++ t +gh++ vl++++sp+g++lvsGs+   +++wd +tg+ + + l 
   Q: 98   CSATIAGHAEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFTCTGHKNWVLCIAWSPDGKHLVSGSKAGELQCWDPQTGKPSGNQLV 188
           57899************************************************************************************** PP
   S: 135  ghdgvvncvvvhpdg.n....llvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlng 220
           gh+++++++++ p   n     +vs+s+D+  r+Wd++  k +  l+g ht +++++++  +g  + +gs+d t+k+w+ ++g+ +r+l+g
   Q: 189  GHKKWITGISWEPVHlNapcrRFVSASKDGDARIWDISLRKSVICLSG-HTLAITCVKWGGDG-VIYTGSQDCTIKVWETSQGKLIRELKG 277
           *********9988644422228*************************9.************98.99************************* PP
   S: 221  htdnvksvrfspnderlvsg 240
           h  +v+s+++s  +e+++ +
   Q: 278  HGHWVNSLALS--TEYVLRT 295
           **********9..5555443 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEDEAVNNVM CQFTDPEGTP LGAPLYLPQN AGPQQLQQIV NKLLNNEEKL PYAFYISDQE 60
LVVPLETYLQ KNKVSVEKVL AIVCQPQAIF RIRPVNRCSA TIAGHAEAVL SVAFSPDGRQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCTTAAAC CCCTAAAATT TAAACCCTAA TTCTAAGTCC TCTTCACTTC CAGTTGCAGA 60
GTGACGGAGC CATAAACCCA AAAACCTCCC AATTCCCATT TTGTAGGTAT AAAAGTATAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR012972--NLE
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08154--NLE
PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005840--C:ribosome
GO:0000027--P:ribosomal large subunit assembly

KEGG

pop:POPTR_0009s06310g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000437	Aegilops tauschii	79.18	0.00e+00	782.00
IUUC-Aml-001793	Ailuropoda melanoleuca	59.15	9.00e-173	599.00
IUUC-Atr-002507	Amborella trichopoda	84.01	0.00e+00	837.00
IUUC-Apl-003964	Anas platyrhynchos	59.29	4.00e-163	567.00
IUUC-Aly-006396	Arabidopsis lyrata	79.83	0.00e+00	810.00
IUUC-Ath-007278	Arabidopsis thaliana	80.25	0.00e+00	811.00
IUUC-Ago-007951	Ashbya gossypii	47.22	7.00e-134	469.00
IUUC-Acl-008298	Aspergillus clavatus	46.90	8.00e-122	430.00
IUUC-Afl-008581	Aspergillus flavus	54.11	4.00e-112	397.00
IUUC-Afu-008906	Aspergillus fumigatus	45.96	2.00e-119	422.00
IUUC-Ani-009189	Aspergillus nidulans	46.07	5.00e-121	427.00
IUUC-Ang-009630	Aspergillus niger	49.01	2.00e-128	452.00
IUUC-Aor-010038	Aspergillus oryzae	48.44	2.00e-132	465.00
IUUC-Ate-010278	Aspergillus terreus	46.76	2.00e-123	435.00
IUUC-Ame-011890	Astyanax mexicanus	57.66	6.00e-164	569.00
IUUC-Bgr-012011	Blumeria graminis	47.10	4.00e-127	447.00
IUUC-Bta-012964	Bos taurus	58.30	8.00e-171	592.00
IUUC-Bci-013592	Botrytis cinerea	47.07	2.00e-122	432.00
IUUC-Bdi-015035	Brachypodium distachyon	79.57	0.00e+00	797.00
IUUC-Bol-015501	Brassica oleracea	80.86	0.00e+00	812.00
IUUC-Bra-017642	Brassica rapa	80.43	0.00e+00	807.00
IUUC-Cel-018430	Caenorhabditis elegans	52.32	5.00e-143	500.00
IUUC-Cja-019125	Callithrix jacchus	58.94	1.00e-171	595.00
IUUC-Cfa-021013	Canis familiaris	58.77	1.00e-161	562.00
IUUC-Cpo-021743	Cavia porcellus	58.51	8.00e-172	595.00
IUUC-Cre-022973	Chlamydomonas reinhardtii	51.94	2.00e-140	491.00
IUUC-Csa-024270	Chlorocebus sabaeus	58.72	1.00e-171	595.00
IUUC-Cin-025795	Ciona intestinalis	56.42	1.00e-165	575.00
IUUC-Csv-025953	Ciona savignyi	57.05	2.00e-166	578.00
IUUC-Cgl-026517	Colletotrichum gloeosporioides	51.74	5.00e-109	387.00
IUUC-Cne-026901	Cryptococcus neoformans	48.38	1.00e-137	482.00
IUUC-Cme-027281	Cyanidioschyzon merolae	47.65	3.00e-116	411.00
IUUC-Dre-028515	Danio rerio	58.72	4.00e-165	573.00
IUUC-Dno-029596	Dasypus novemcinctus	58.72	7.00e-172	596.00
IUUC-Dor-030494	Dipodomys ordii	58.11	7.00e-172	596.00
IUUC-Dse-031538	Dothistroma septosporum	50.33	2.00e-129	455.00
IUUC-Dme-031974	Drosophila melanogaster	54.74	1.00e-153	535.00
IUUC-Ete-032948	Echinops telfairi	65.22	2.00e-79	289.00
IUUC-Eca-033399	Equus caballus	58.85	5.00e-171	593.00
IUUC-Eeu-035013	Erinaceus europaeus	64.25	3.00e-78	285.00
IUUC-Fca-035860	Felis catus	57.87	2.00e-170	591.00
IUUC-Fal-037069	Ficedula albicollis	63.22	5.00e-92	330.00
IUUC-Fox-038059	Fusarium oxysporum	48.85	8.00e-123	433.00
IUUC-Fso-038445	Fusarium solani	48.39	1.00e-121	429.00
IUUC-Gmo-039319	Gadus morhua	57.20	5.00e-155	540.00
IUUC-Ggr-040095	Gaeumannomyces graminis	46.53	3.00e-124	438.00
IUUC-Gga-040303	Gallus gallus	63.64	1.00e-91	328.00
IUUC-Gac-042267	Gasterosteus aculeatus	58.53	2.00e-161	561.00
IUUC-Gma-043974	Glycine max	89.74	0.00e+00	893.00
IUUC-Ggo-044637	Gorilla gorilla	58.64	8.00e-170	589.00
IUUC-Hsa-046128	Homo sapiens	58.94	5.00e-172	597.00
IUUC-Hvu-047373	Hordeum vulgare	77.97	0.00e+00	776.00
IUUC-Itr-048070	Ictidomys tridecemlineatus	57.47	4.00e-170	590.00
IUUC-Kpa-049274	Komagataella pastoris	46.58	3.00e-131	461.00
IUUC-Lch-049907	Latimeria chalumnae	55.37	2.00e-157	548.00
IUUC-Lpe-050778	Leersia perrieri	75.00	0.00e+00	726.00
IUUC-Loc-051889	Lepisosteus oculatus	58.21	2.00e-165	574.00
IUUC-Lma-053041	Leptosphaeria maculans	50.82	2.00e-122	432.00
IUUC-Laf-053598	Loxodonta africana	58.94	1.00e-172	598.00
IUUC-Mcc-055660	Macaca mulatta	58.72	2.00e-171	595.00
IUUC-Meu-056197	Macropus eugenii	52.14	1.00e-144	505.00
IUUC-Mor-056949	Magnaporthe oryzae	46.97	1.00e-119	423.00
IUUC-Mpo-057571	Magnaporthe poae	54.63	2.00e-66	246.00
IUUC-Mtr-058530	Medicago truncatula	87.55	0.00e+00	840.00
IUUC-Mla-059133	Melampsora laricipopulina	48.47	3.00e-131	461.00
IUUC-Mga-059252	Meleagris gallopavo	61.43	6.00e-134	469.00
IUUC-Mvi-060522	Microbotryum violaceum	46.19	4.00e-136	477.00
IUUC-Mmr-061117	Microcebus murinus	57.41	2.00e-168	584.00
IUUC-Mdo-062892	Monodelphis domestica	59.36	5.00e-172	597.00
IUUC-Mmu-064108	Mus musculus	58.30	7.00e-166	576.00
IUUC-Mac-064430	Musa acuminata	88.91	0.00e+00	877.00
IUUC-Mpu-065882	Mustela putorius furo	58.30	6.00e-170	589.00
IUUC-Mlu-068123	Myotis lucifugus	58.94	2.00e-171	594.00
IUUC-Nfi-068484	Neosartorya fischeri	45.96	1.00e-119	423.00
IUUC-Ncr-068649	Neurospora crassa	44.56	7.00e-114	403.00
IUUC-Nle-069140	Nomascus leucogenys	58.85	4.00e-171	593.00
IUUC-Opr-070220	Ochotona princeps	54.41	1.00e-146	512.00
IUUC-Ont-072643	Oreochromis niloticus	58.19	7.00e-165	573.00
IUUC-Ocu-074007	Oryctolagus cuniculus	60.00	5.00e-169	587.00
IUUC-Oba-075904	Oryza barthii	80.95	0.00e+00	798.00
IUUC-Obr-076280	Oryza brachyantha	79.96	0.00e+00	793.00
IUUC-Ogl-077425	Oryza glaberrima	80.52	0.00e+00	795.00
IUUC-Ogu-078586	Oryza glumaepatula	79.53	0.00e+00	796.00
IUUC-Oin-079489	Oryza indica	78.79	0.00e+00	768.00
IUUC-Olo-080766	Oryza longistaminata	80.69	0.00e+00	796.00
IUUC-Ome-081905	Oryza meridionalis	81.17	0.00e+00	798.00
IUUC-Oni-083022	Oryza nivara	80.95	0.00e+00	799.00
IUUC-Opu-083615	Oryza punctata	81.17	0.00e+00	798.00
IUUC-Oru-085076	Oryza rufipogon	80.95	0.00e+00	799.00
IUUC-Osa-085516	Oryza sativa	80.95	0.00e+00	799.00
IUUC-Ola-087290	Oryzias latipes	57.35	8.00e-165	572.00
IUUC-Olu-087898	Ostreococcus lucimarinus	57.63	6.00e-166	576.00
IUUC-Oga-088980	Otolemur garnettii	58.00	3.00e-170	590.00
IUUC-Oar-089580	Ovis aries	55.88	4.00e-140	490.00
IUUC-Ptr-090845	Pan troglodytes	58.21	3.00e-168	584.00
IUUC-Pan-092836	Papio anubis	58.72	4.00e-172	597.00
IUUC-Pno-095052	Phaeosphaeria nodorum	48.89	2.00e-125	441.00
IUUC-Ppa-095432	Physcomitrella patens	76.13	0.00e+00	763.00
IUUC-Pfo-096963	Poecilia formosa	52.31	5.00e-141	493.00
IUUC-Pab-097716	Pongo abelii	56.08	1.00e-160	558.00
IUUC-Pca-100682	Procavia capensis	60.73	5.00e-131	459.00
IUUC-Ppe-101819	Prunus persica	90.73	0.00e+00	886.00
IUUC-Pva-102338	Pteropus vampyrus	54.78	1.00e-117	415.00
IUUC-Pgr-103583	Puccinia graminis	53.09	2.00e-129	455.00
IUUC-Ptt-103737	Puccinia triticina	37.62	6.00e-98	350.00
IUUC-Pte-104150	Pyrenophora teres	49.89	3.00e-124	438.00
IUUC-Pyt-104606	Pyrenophora triticirepentis	49.89	9.00e-125	439.00
IUUC-Rno-105987	Rattus norvegicus	58.30	4.00e-171	593.00
IUUC-Sce-106315	Saccharomyces cerevisiae	51.02	1.00e-135	476.00
IUUC-Sha-107273	Sarcophilus harrisii	59.36	3.00e-174	603.00
IUUC-Sja-107677	Schizosaccharomyces japonicus	46.82	3.00e-122	431.00
IUUC-Spo-108092	Schizosaccharomyces pombe	46.38	3.00e-123	434.00
IUUC-Ssl-108442	Sclerotinia sclerotiorum	46.19	4.00e-124	437.00
IUUC-Smo-108855	Selaginella moellendorffii	70.12	0.00e+00	719.00
IUUC-Sit-110329	Setaria italica	80.09	0.00e+00	799.00
IUUC-Sly-111830	Solanum lycopersicum	88.60	0.00e+00	872.00
IUUC-Stu-112603	Solanum tuberosum	88.60	0.00e+00	870.00
IUUC-Sar-113504	Sorex araneus	53.24	6.00e-41	161.00
IUUC-Sbi-114560	Sorghum bicolor	79.23	0.00e+00	795.00
IUUC-Sre-115133	Sporisorium reilianum	40.44	7.00e-125	440.00
IUUC-Ssc-115903	Sus scrofa	57.87	5.00e-170	590.00
IUUC-Tgu-116798	Taeniopygia guttata	57.87	6.00e-167	579.00
IUUC-Tru-118361	Takifugu rubripes	56.93	3.00e-165	574.00
IUUC-Tsy-118849	Tarsius syrichta	58.19	3.00e-170	590.00
IUUC-Tni-120094	Tetraodon nigroviridis	56.96	2.00e-165	574.00
IUUC-Tca-121634	Theobroma cacao	89.60	0.00e+00	881.00
IUUC-Tre-122051	Trichoderma reesei	47.50	1.00e-116	412.00
IUUC-Tvi-122322	Trichoderma virens	48.98	6.00e-121	427.00
IUUC-Tae-123133	Triticum aestivum	79.09	0.00e+00	787.00
IUUC-Tur-126766	Triticum urartu	70.11	0.00e+00	753.00
IUUC-Tme-127175	Tuber melanosporum	51.76	1.00e-137	482.00
IUUC-Tbe-127779	Tupaia belangeri	60.89	6.00e-159	553.00
IUUC-Ttr-128224	Tursiops truncatus	58.64	1.00e-154	538.00
IUUC-Uma-129537	Ustilago maydis	40.71	5.00e-126	444.00
IUUC-Vda-129927	Verticillium dahliae	45.62	1.00e-114	406.00
IUUC-Vpa-130658	Vicugna pacos	53.85	9.00e-86	310.00
IUUC-Vvi-131659	Vitis vinifera	90.85	0.00e+00	895.00
IUUC-Xtr-132918	Xenopus tropicalis	54.01	2.00e-155	541.00
IUUC-Xma-133700	Xiphophorus maculatus	58.19	2.00e-166	578.00
IUUC-Yli-134478	Yarrowia lipolytica	49.18	1.00e-136	479.00
IUUC-Zma-135835	Zea mays	75.60	0.00e+00	787.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence