iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mac-065538

Ensembl Protein ID

GSMUA_Achr3P06320_001

UniProt Accession

M0SC99; M0SC99_MUSAM

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GSMUA_Achr3G06320_001	GSMUA_Achr3T06320_001	GSMUA_Achr3P06320_001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.50e-22	78.2	166	241

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++ f Cp+++++M dPv+++sG tydr++I++w++++        cPvtr  ++e  l  n +lr++i++w e+n+
   Q: 166  YQSFFCPLTKKIMDDPVTIESGLTYDREAIAEWFERSIDvseniVCPVTRMDVKEAALSSNVALRNTIKEWKERNE 241
           789*******************************6666566667****************************9997 PP

Organism

Musa acuminata

Protein Sequence
(Fasta)

MSSVATEDAE HNNSMELGSP PHVTSPPISE SKQAGNTPPS RSDFLLSLST KVDIATELVA 60
KCSNGAQAVP DDEVKSFIKQ LEGVIRSMAD DLRDIPLSME SLSGEMIHVG LQINGQCDTD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCATCAG TTGCTACTGA GGATGCTGAG CATAATAATT CCATGGAGCT GGGAAGCCCT 60
CCCCATGTCA CCTCTCCTCC TATTTCAGAG TCAAAGCAAG CAGGAAATAC TCCTCCAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002664	Amborella trichopoda	42.91	0.00e+00	673.00
IUUC-Aly-006424	Arabidopsis lyrata	47.21	0.00e+00	721.00
IUUC-Ath-006596	Arabidopsis thaliana	43.41	0.00e+00	668.00
IUUC-Bdi-014572	Brachypodium distachyon	48.94	0.00e+00	800.00
IUUC-Bol-016179	Brassica oleracea	45.47	0.00e+00	674.00
IUUC-Bra-017617	Brassica rapa	45.84	0.00e+00	674.00
IUUC-Hvu-047800	Hordeum vulgare	47.17	0.00e+00	803.00
IUUC-Lpe-050817	Leersia perrieri	46.88	0.00e+00	796.00
IUUC-Oba-075004	Oryza barthii	47.67	0.00e+00	816.00
IUUC-Obr-076391	Oryza brachyantha	43.95	0.00e+00	667.00
IUUC-Ogl-077375	Oryza glaberrima	47.67	0.00e+00	816.00
IUUC-Ogu-078488	Oryza glumaepatula	47.27	0.00e+00	818.00
IUUC-Oin-079369	Oryza indica	48.78	0.00e+00	791.00
IUUC-Olo-080998	Oryza longistaminata	44.22	0.00e+00	720.00
IUUC-Ome-081243	Oryza meridionalis	47.27	0.00e+00	807.00
IUUC-Oni-082268	Oryza nivara	47.37	0.00e+00	818.00
IUUC-Opu-083388	Oryza punctata	47.25	0.00e+00	833.00
IUUC-Oru-084387	Oryza rufipogon	47.57	0.00e+00	820.00
IUUC-Osa-086255	Oryza sativa	48.74	0.00e+00	803.00
IUUC-Pop-099123	Populus trichocarpa	47.06	0.00e+00	790.00
IUUC-Ppe-101776	Prunus persica	45.65	0.00e+00	788.00
IUUC-Sit-110322	Setaria italica	47.99	0.00e+00	781.00
IUUC-Sly-111047	Solanum lycopersicum	41.53	0.00e+00	728.00
IUUC-Stu-112113	Solanum tuberosum	48.45	0.00e+00	740.00
IUUC-Sbi-113818	Sorghum bicolor	47.06	0.00e+00	768.00
IUUC-Tca-121365	Theobroma cacao	47.27	0.00e+00	830.00
IUUC-Tae-123677	Triticum aestivum	46.66	0.00e+00	780.00
IUUC-Tur-126161	Triticum urartu	46.09	0.00e+00	768.00
IUUC-Vvi-131502	Vitis vinifera	52.45	0.00e+00	790.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence