iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114695

UUCD1 version

UUC-SoB-01726

Ensembl Protein ID

Sb07g026460.1

UniProt Accession

A0A1B6PIP5; A0A1B6PIP5_SORBI

Genbank Protein ID

KXG25551.1

Protein Name

Ubiquitinyl hydrolase 1

Genbank Nucleotide ID

CM000766

Gene Name

SORBI_007G196100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g026460	Sb07g026460.1	Sb07g026460.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	6.90e-58	197.2	670	824

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 186  slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLi 281
           +l++      ++ +l  +n+y+ ++   + +a +k  + klP+vL+lhLkR+   ++++  +k++ +v f++ Ld+ +f+ s++ + k++++Y+L 
   Q: 670  DLRKQVGLDLSANMLG-DNQYEQKER--SGRAIQKPHIMKLPPVLTLHLKRY--IKNGNEYHKNEAHVMFKEVLDVGRFMDSRSVD-KNNTIYRLA 759
           5555555556666774.677765554..45689999****************..77889999********************7765.56******* PP
   S: 282  avvvHsG..slssGHYvayvkn...........ekgkWllfdDskVtevkeeevleetgstaYvlfYk 336
           avv H G   ++ GHYvayv+            ++ +W++ dDs+++ev+ eevl+   +++YvlfY+
   Q: 760  AVVEHRGgpFMNVGHYVAYVRAskirnqqqqssNSSSWFCADDSNIREVTLEEVLK---CQPYVLFYE 824
           *******7779***********888876665544444*******************...********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGDMRLRPWE ADESSRSRDS KALRLDLLAT TATVLGSRRE DCPELTDNHH DDWCCDHVPT 60
DSAHKDILSL SLLSDDAGIC KDCSREEGAS GQPKYHRILV CLECGRHSCG DLRSYLPYGH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTGACA TGAGGCTGAG ACCATGGGAG GCGGATGAGA GCTCGCGGTC GCGGGATTCC 60
AAAGCTCTGC GGCTGGACTT GTTGGCTACA ACGGCAACGG TGTTGGGCTC TCGTCGGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001048	Aegilops tauschii	32.06	1.00e-88	320.00
IUUC-Bdi-014985	Brachypodium distachyon	34.32	3.00e-93	335.00
IUUC-Cel-018308	Caenorhabditis elegans	36.26	1.00e-09	57.00
IUUC-Fox-037837	Fusarium oxysporum	35.71	8.00e-09	54.70
IUUC-Fso-038234	Fusarium solani	37.76	2.00e-09	57.00
IUUC-Hvu-047538	Hordeum vulgare	34.36	1.00e-90	327.00
IUUC-Lpe-050943	Leersia perrieri	35.76	2.00e-99	356.00
IUUC-Oba-075758	Oryza barthii	34.53	6.00e-94	338.00
IUUC-Obr-076602	Oryza brachyantha	34.31	4.00e-96	345.00
IUUC-Ogl-077120	Oryza glaberrima	35.52	1.00e-98	353.00
IUUC-Ogu-078236	Oryza glumaepatula	34.30	7.00e-100	357.00
IUUC-Oin-079087	Oryza indica	35.79	3.00e-100	358.00
IUUC-Olo-080785	Oryza longistaminata	37.97	2.00e-104	372.00
IUUC-Ome-081974	Oryza meridionalis	35.04	5.00e-98	351.00
IUUC-Oni-082810	Oryza nivara	35.79	3.00e-100	359.00
IUUC-Opu-083353	Oryza punctata	35.47	2.00e-104	374.00
IUUC-Oru-085230	Oryza rufipogon	37.78	2.00e-100	358.00
IUUC-Osa-085674	Oryza sativa	34.78	8.00e-97	347.00
IUUC-Sre-114910	Sporisorium reilianum	27.75	7.00e-11	61.60
IUUC-Tre-121937	Trichoderma reesei	38.78	1.00e-09	57.40
IUUC-Tae-124214	Triticum aestivum	33.80	3.00e-87	315.00
IUUC-Tur-126231	Triticum urartu	32.46	1.00e-87	317.00
IUUC-Vda-129757	Verticillium dahliae	35.64	3.00e-09	56.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence