iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017941

Ensembl Protein ID

Bra007494.1-P

UniProt Accession

M4CTF1; M4CTF1_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra007494	Bra007494.1	Bra007494.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	78.24	1.00e-161	566.00	IUUC-Ath-007179

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MRVSEEFNVR GDFRSRRDLI SGLPEELATE CLVRVPFEFH SSMKSVSRLW RSLVADRSFD 60
RERRRAGKDE SLLCLVQPLT SQSSPVNSSV DGEVSEKKKE EEGESHSHSQ QQLQQPRVIG 120

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Nucleotide Sequence
(Fasta)

ATGAGAGTGT CGGAGGAATT TAATGTAAGA GGAGACTTTC GGAGTCGTCG GGATTTAATC 60
TCGGGACTAC CGGAGGAATT AGCGACGGAG TGTTTGGTTA GAGTTCCGTT CGAGTTTCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0880--Kelch repeat
KW-1185--Reference proteome
KW-0677--Repeat

Interpro

IPR001810--F-box_dom
IPR015916--Gal_Oxidase_b-propeller
IPR006652--Kelch_1

Pfam

PF00646--F-box
PF01344--Kelch_1

SMART

SM00256--FBOX
SM00612--Kelch

Gene Ontology

GO:0005829--C:cytosol
GO:0080037--P:negative regulation of cytokinin-activated signaling pathway
GO:2000762--P:regulation of phenylpropanoid metabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000220	Aegilops tauschii	26.40	2.00e-06	48.10
IUUC-Aly-006001	Arabidopsis lyrata	79.46	2.00e-169	588.00
IUUC-Ath-007179	Arabidopsis thaliana	77.02	1.00e-167	582.00
IUUC-Bdi-014291	Brachypodium distachyon	40.50	2.00e-45	176.00
IUUC-Cja-019472	Callithrix jacchus	27.43	2.00e-11	63.20
IUUC-Cre-022752	Chlamydomonas reinhardtii	23.61	3.20e+00	28.10
IUUC-Dre-028411	Danio rerio	27.27	1.00e-13	70.90
IUUC-Ggr-040041	Gaeumannomyces graminis	29.55	4.00e-02	32.00
IUUC-Gac-042373	Gasterosteus aculeatus	26.29	7.00e-11	62.00
IUUC-Hvu-047595	Hordeum vulgare	40.19	4.00e-49	188.00
IUUC-Loc-052323	Lepisosteus oculatus	27.65	1.00e-09	57.80
IUUC-Mor-057291	Magnaporthe oryzae	22.38	1.10e-02	33.10
IUUC-Mac-064513	Musa acuminata	40.81	7.00e-25	107.00
IUUC-Opr-071035	Ochotona princeps	30.89	1.00e-08	54.30
IUUC-Ont-072620	Oreochromis niloticus	28.15	2.00e-09	57.00
IUUC-Oba-075542	Oryza barthii	37.95	7.00e-34	137.00
IUUC-Ogl-077394	Oryza glaberrima	38.71	9.00e-49	187.00
IUUC-Ogu-078293	Oryza glumaepatula	39.07	9.00e-50	190.00
IUUC-Oin-079587	Oryza indica	38.71	9.00e-49	187.00
IUUC-Ome-081207	Oryza meridionalis	38.71	7.00e-49	187.00
IUUC-Oni-082785	Oryza nivara	38.71	9.00e-49	187.00
IUUC-Opu-083469	Oryza punctata	38.62	1.00e-49	190.00
IUUC-Oru-084871	Oryza rufipogon	39.07	8.00e-50	190.00
IUUC-Osa-085305	Oryza sativa	39.07	8.00e-50	190.00
IUUC-Olu-087696	Ostreococcus lucimarinus	27.48	5.00e-05	40.80
IUUC-Pop-099744	Populus trichocarpa	42.79	8.00e-83	300.00
IUUC-Pca-100693	Procavia capensis	28.00	2.00e-11	63.50
IUUC-Ppe-101415	Prunus persica	40.14	2.00e-54	205.00
IUUC-Pva-102153	Pteropus vampyrus	28.00	2.00e-11	63.90
IUUC-Sit-109955	Setaria italica	34.62	1.00e-45	176.00
IUUC-Sbi-114689	Sorghum bicolor	35.25	9.00e-54	203.00
IUUC-Tru-118452	Takifugu rubripes	30.43	2.00e-09	57.80
IUUC-Tae-125085	Triticum aestivum	40.95	4.00e-51	194.00
IUUC-Tur-126089	Triticum urartu	29.22	9.00e-07	49.30
IUUC-Vda-129714	Verticillium dahliae	19.70	6.80e-01	27.70
IUUC-Vpa-130421	Vicugna pacos	28.00	2.00e-11	63.90
IUUC-Vvi-131439	Vitis vinifera	45.91	1.00e-64	239.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence