iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048724

Ensembl Protein ID

ENSSTOP00000004347.2

UniProt Accession

I3M4Z2; I3M4Z2_ICTTR

Genbank Protein ID

ENSSTOP00000004347

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01031181

Gene Name

RNF40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000004831.2	ENSSTOT00000004844.2	ENSSTOP00000004347.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	29.76	4.00e-30	130.00	IUUC-Ath-007462
E3 activity/RING/RING	54.79	3.00e-110	397.00	IUUC-Dme-032034
E3 activity/RING/RING	96.10	0.00e+00	1689.00	IUUC-Hsa-045732
E3 activity/RING/RING	93.91	0.00e+00	1657.00	IUUC-Rno-105165
E3 activity/RING/RING	24.63	1.00e-15	80.50	IUUC-Sce-106384

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MSGPGNKRAA GDGGSGPPEK KLSREEKTTT TLIEPIRLGG ISSTEEMDLK VLQFKNKKLA 60
ERLEQRQACE DELRERIEKL EKRQATDDAT LLIVNRYWAQ LDEIVEALLR CHESQREPSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCTAGGCT GACCCTGCTG TCGGTGAAGG CCCGGGCTGG CGGGGGCGGG ATCTTTCAGG 60
TGTGTGCAGG TGACCTCTCG GGGCTGTGGA GCATCGGCCG CTGCCACATC TCTGCTCTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0033503--C:HULC complex
GO:0016020--C:membrane
GO:0005654--C:nucleoplasm
GO:0003730--F:mRNA 3'-UTR binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0033523--P:histone H2B ubiquitination
GO:0010390--P:histone monoubiquitination
GO:1900364--P:negative regulation of mRNA polyadenylation
GO:2001168--P:positive regulation of histone H2B ubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001027	Aegilops tauschii	29.24	9.00e-13	68.60
IUUC-Aml-002295	Ailuropoda melanoleuca	97.50	0.00e+00	1742.00
IUUC-Atr-002836	Amborella trichopoda	31.12	8.00e-27	115.00
IUUC-Aca-004850	Anolis carolinensis	75.44	0.00e+00	677.00
IUUC-Aly-006055	Arabidopsis lyrata	28.42	2.00e-29	124.00
IUUC-Ath-007462	Arabidopsis thaliana	28.95	1.00e-29	125.00
IUUC-Ang-009601	Aspergillus niger	26.20	2.00e-16	80.90
IUUC-Ame-011745	Astyanax mexicanus	81.51	2.00e-152	533.00
IUUC-Bta-013173	Bos taurus	96.40	0.00e+00	1709.00
IUUC-Bci-013926	Botrytis cinerea	37.74	2.00e-08	54.30
IUUC-Bol-015421	Brassica oleracea	28.93	2.00e-28	120.00
IUUC-Bra-016804	Brassica rapa	29.04	9.00e-35	142.00
IUUC-Cja-019042	Callithrix jacchus	95.10	0.00e+00	1653.00
IUUC-Cfa-020318	Canis familiaris	97.00	0.00e+00	1735.00
IUUC-Cpo-021539	Cavia porcellus	95.60	0.00e+00	1719.00
IUUC-Cre-022940	Chlamydomonas reinhardtii	37.93	7.00e-09	55.50
IUUC-Csa-024051	Chlorocebus sabaeus	96.40	0.00e+00	1627.00
IUUC-Cin-025174	Ciona intestinalis	44.02	0.00e+00	695.00
IUUC-Csv-025830	Ciona savignyi	54.52	6.00e-97	348.00
IUUC-Cgl-026569	Colletotrichum gloeosporioides	42.31	8.00e-10	58.90
IUUC-Cne-026878	Cryptococcus neoformans	26.57	1.00e-15	78.60
IUUC-Dre-028171	Danio rerio	80.67	1.00e-153	536.00
IUUC-Dno-028892	Dasypus novemcinctus	96.20	0.00e+00	1678.00
IUUC-Dor-030268	Dipodomys ordii	94.54	0.00e+00	791.00
IUUC-Dme-032034	Drosophila melanogaster	43.29	0.00e+00	719.00
IUUC-Ete-032505	Echinops telfairi	93.50	0.00e+00	656.00
IUUC-Eca-033436	Equus caballus	97.00	0.00e+00	1760.00
IUUC-Eeu-035291	Erinaceus europaeus	89.99	0.00e+00	1309.00
IUUC-Fca-035720	Felis catus	96.70	0.00e+00	1731.00
IUUC-Fox-038017	Fusarium oxysporum	28.26	1.00e-10	61.60
IUUC-Fso-038414	Fusarium solani	26.36	2.00e-10	60.80
IUUC-Gmo-039269	Gadus morhua	80.12	2.00e-143	502.00
IUUC-Gac-041303	Gasterosteus aculeatus	64.36	1.00e-152	533.00
IUUC-Gma-042797	Glycine max	28.10	2.00e-36	147.00
IUUC-Ggo-045426	Gorilla gorilla	96.40	0.00e+00	1702.00
IUUC-Hsa-045732	Homo sapiens	96.10	0.00e+00	1732.00
IUUC-Hvu-047689	Hordeum vulgare	28.10	5.00e-28	119.00
IUUC-Kpa-049345	Komagataella pastoris	27.59	2.00e-10	61.20
IUUC-Lch-049429	Latimeria chalumnae	84.46	3.00e-162	565.00
IUUC-Lpe-051253	Leersia perrieri	31.58	2.00e-34	140.00
IUUC-Laf-054267	Loxodonta africana	96.50	0.00e+00	1720.00
IUUC-Mcc-055240	Macaca mulatta	96.30	0.00e+00	1626.00
IUUC-Meu-056750	Macropus eugenii	83.42	0.00e+00	1411.00
IUUC-Mor-057068	Magnaporthe oryzae	45.28	2.00e-12	67.00
IUUC-Mtr-057632	Medicago truncatula	28.85	2.00e-33	137.00
IUUC-Mla-059072	Melampsora laricipopulina	28.34	4.00e-27	116.00
IUUC-Mvi-060341	Microbotryum violaceum	29.93	2.00e-23	103.00
IUUC-Mmr-061177	Microcebus murinus	96.50	0.00e+00	1722.00
IUUC-Mdo-062415	Monodelphis domestica	84.22	0.00e+00	1436.00
IUUC-Mmu-063981	Mus musculus	93.61	0.00e+00	1682.00
IUUC-Mac-065103	Musa acuminata	30.85	2.00e-42	167.00
IUUC-Mpu-066498	Mustela putorius furo	96.20	0.00e+00	1654.00
IUUC-Mlu-067242	Myotis lucifugus	95.50	0.00e+00	1696.00
IUUC-Nle-069320	Nomascus leucogenys	96.66	0.00e+00	866.00
IUUC-Opr-070286	Ochotona princeps	92.41	0.00e+00	1035.00
IUUC-Ont-071299	Oreochromis niloticus	80.28	3.00e-154	539.00
IUUC-Oan-073538	Ornithorhynchus anatinus	77.48	0.00e+00	627.00
IUUC-Ocu-073799	Oryctolagus cuniculus	96.20	0.00e+00	1708.00
IUUC-Oba-075000	Oryza barthii	29.24	4.00e-30	126.00
IUUC-Obr-076532	Oryza brachyantha	30.18	3.00e-32	134.00
IUUC-Ogl-077200	Oryza glaberrima	31.11	1.00e-32	134.00
IUUC-Ogu-078279	Oryza glumaepatula	29.24	3.00e-30	126.00
IUUC-Oin-079097	Oryza indica	31.11	1.00e-32	134.00
IUUC-Olo-080612	Oryza longistaminata	53.33	3.00e-15	77.80
IUUC-Ome-081304	Oryza meridionalis	30.99	2.00e-31	130.00
IUUC-Oni-082162	Oryza nivara	29.24	4.00e-30	126.00
IUUC-Opu-083683	Oryza punctata	51.52	2.00e-16	81.30
IUUC-Oru-084382	Oryza rufipogon	29.24	4.00e-30	126.00
IUUC-Osa-085839	Oryza sativa	51.52	2.00e-16	81.30
IUUC-Ola-086435	Oryzias latipes	67.61	2.00e-156	546.00
IUUC-Oga-089016	Otolemur garnettii	89.87	0.00e+00	1580.00
IUUC-Oar-089589	Ovis aries	96.80	0.00e+00	1724.00
IUUC-Ptr-090530	Pan troglodytes	95.79	0.00e+00	1315.00
IUUC-Pan-092502	Papio anubis	96.30	0.00e+00	1628.00
IUUC-Psi-093155	Pelodiscus sinensis	73.70	5.00e-142	497.00
IUUC-Pno-095079	Phaeosphaeria nodorum	27.52	1.00e-13	71.60
IUUC-Ppa-095735	Physcomitrella patens	34.99	2.00e-42	167.00
IUUC-Pfo-097527	Poecilia formosa	52.37	0.00e+00	743.00
IUUC-Pab-098619	Pongo abelii	96.80	0.00e+00	1716.00
IUUC-Pop-099376	Populus trichocarpa	30.00	4.00e-36	146.00
IUUC-Pca-100544	Procavia capensis	95.40	0.00e+00	1701.00
IUUC-Ppe-102065	Prunus persica	29.68	9.00e-32	132.00
IUUC-Pva-102479	Pteropus vampyrus	97.30	0.00e+00	1439.00
IUUC-Pgr-103536	Puccinia graminis	27.51	4.00e-22	99.80
IUUC-Ptt-104014	Puccinia triticina	26.98	3.00e-05	43.90
IUUC-Pte-104415	Pyrenophora teres	33.33	2.00e-13	71.20
IUUC-Pyt-104762	Pyrenophora triticirepentis	30.39	2.00e-13	71.20
IUUC-Rno-105165	Rattus norvegicus	93.91	0.00e+00	1662.00
IUUC-Sce-106384	Saccharomyces cerevisiae	24.63	3.00e-16	80.50
IUUC-Sha-107602	Sarcophilus harrisii	85.24	0.00e+00	1467.00
IUUC-Ssl-108546	Sclerotinia sclerotiorum	37.74	9.00e-09	55.50
IUUC-Smo-109550	Selaginella moellendorffii	30.19	5.00e-39	155.00
IUUC-Sit-109889	Setaria italica	29.53	8.00e-32	132.00
IUUC-Sly-111490	Solanum lycopersicum	33.16	7.00e-42	165.00
IUUC-Sar-113755	Sorex araneus	92.92	0.00e+00	1342.00
IUUC-Sbi-114734	Sorghum bicolor	30.90	6.00e-24	103.00
IUUC-Sre-115087	Sporisorium reilianum	24.91	3.00e-16	80.10
IUUC-Ssc-116134	Sus scrofa	95.30	0.00e+00	1722.00
IUUC-Tru-117867	Takifugu rubripes	80.28	1.00e-154	540.00
IUUC-Tsy-119065	Tarsius syrichta	92.06	0.00e+00	1486.00
IUUC-Tca-121060	Theobroma cacao	33.06	4.00e-40	159.00
IUUC-Tre-122150	Trichoderma reesei	41.51	2.00e-10	61.20
IUUC-Tvi-122431	Trichoderma virens	41.51	2.00e-10	60.80
IUUC-Tae-124308	Triticum aestivum	29.83	2.00e-31	130.00
IUUC-Tur-126160	Triticum urartu	50.00	5.00e-16	79.70
IUUC-Tme-127177	Tuber melanosporum	23.27	1.00e-12	68.20
IUUC-Tbe-127597	Tupaia belangeri	88.53	0.00e+00	1073.00
IUUC-Ttr-128303	Tursiops truncatus	96.12	0.00e+00	1670.00
IUUC-Uma-129488	Ustilago maydis	27.68	6.00e-19	89.40
IUUC-Vda-129815	Verticillium dahliae	40.38	1.00e-09	58.20
IUUC-Vvi-131316	Vitis vinifera	32.36	2.00e-35	144.00
IUUC-Xma-133607	Xiphophorus maculatus	61.20	1.00e-153	536.00
IUUC-Yli-134445	Yarrowia lipolytica	40.62	6.00e-13	69.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence