iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058388

Ensembl Protein ID

KEH31714

UniProt Accession

A0A072UPE3; A0A072UPE3_MEDTR

Genbank Protein ID

KEH31714.1

Protein Name

Zinc finger, C3HC4 type (RING finger) protein

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g102870

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g102870	KEH31714	KEH31714

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.00e-07	31.3	316	357

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ ++dg  ++ lpCgH+fh +C+ kw         +++CPlC+
   Q: 316  CCICLSAYDDGaeLRQLPCGHHFHCTCVDKW------LHINATCPLCK 357
           ********88766999***************......**********7 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MATTDPTPLI GNSSDESNSG RRVLRAPSLR QAARFLRQAS GRRLMREPSM MVRETAAEQL 60
EERQSDWAYS KPVVILDILW NFVFIIAAVT VLILSRNESP SSPLRLWILG YALQCVLHVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGACGA CGGATCCAAC GCCGTTAATT GGAAATTCAT CGGACGAATC AAACTCTGGA 60
CGGAGAGTTC TCCGTGCGCC GAGTCTCCGG CAAGCGGCGC GGTTTCTACG GCAAGCGAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_4g102870

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002539	Amborella trichopoda	61.17	2.00e-103	368.00
IUUC-Afl-008548	Aspergillus flavus	35.71	2.00e-11	62.40
IUUC-Bdi-014788	Brachypodium distachyon	64.22	9.00e-114	402.00
IUUC-Gma-042691	Glycine max	78.17	1.00e-147	515.00
IUUC-Hvu-047150	Hordeum vulgare	66.57	5.00e-113	400.00
IUUC-Lpe-051532	Leersia perrieri	68.01	1.00e-107	382.00
IUUC-Mac-064658	Musa acuminata	65.50	1.00e-127	448.00
IUUC-Oba-075346	Oryza barthii	67.72	3.00e-115	407.00
IUUC-Ogl-077385	Oryza glaberrima	67.72	3.00e-115	407.00
IUUC-Ogu-078850	Oryza glumaepatula	67.72	4.00e-115	407.00
IUUC-Ome-081898	Oryza meridionalis	68.01	2.00e-107	381.00
IUUC-Oni-082330	Oryza nivara	67.72	3.00e-115	407.00
IUUC-Opu-083495	Oryza punctata	67.92	2.00e-108	385.00
IUUC-Oru-084814	Oryza rufipogon	67.44	3.00e-115	407.00
IUUC-Osa-085284	Oryza sativa	67.44	3.00e-115	407.00
IUUC-Ppa-095516	Physcomitrella patens	55.75	7.00e-99	353.00
IUUC-Ppe-102030	Prunus persica	71.83	5.00e-130	456.00
IUUC-Stu-112030	Solanum tuberosum	61.08	7.00e-114	403.00
IUUC-Tae-123565	Triticum aestivum	66.86	1.00e-119	422.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence