iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007347

UUCD1 version

UUC-ArT-00274

Ensembl Protein ID

AT2G17450.1

UniProt Accession

O22755; ATL44_ARATH

Genbank Protein ID

AAC68673.1; AAD32903.1; AEC06631.1; AAK44054.1; AAL33807.1

Protein Name

Probable E3 ubiquitin-protein ligase ATL44; RING-H2 finger A3a; RING-H2 finger protein ATL44; RING-H2 zinc finger protein RHA3a; RING-type E3 ubiquitin transferase ATL44

Genbank Nucleotide ID

AF078824; AC007584; CP002685; AF370239; AY062961

Gene Name

ATL44; RHA3A; At2g17450; F5J6.22; MJB20

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G17450	AT2G17450.1	AT2G17450.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.50e-10	40.8	102	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+df   ++ +vlp CgH fh +C+ kw         + +CP Cr
   Q: 102  CAICLTDFadGEEIRVLPlCGHSFHVECIDKW------LVSRSSCPSCR 144
           ********66333*******************......9999******8 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Probable E3 ubiquitin-protein ligase that may possess E3 ubiquitin ligase activity in vitro.

Protein Sequence
(Fasta)

MTRPSRLLET AAPPPQPSEE MIAAESDMVV ILSALLCALI CVAGLAAVVR CAWLRRFTAG 60
GDSPSPNKGL KKKALQSLPR STFTAAESTS GAAAEEGDST ECAICLTDFA DGEEIRVLPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAATTTCAAA AAATATAATC ATCTCTCTCA CTATCTGAAT TTTAAATAAC ATACAACAAA 60
TATTTTTAAT ATATAGAATA AAATCAAAAT AAGTCATCAT GATCTCAACA TCAGTTGACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT2G17450

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006573	Arabidopsis lyrata	97.84	7.00e-95	338.00
IUUC-Bol-016403	Brassica oleracea	83.07	6.00e-82	295.00
IUUC-Bra-017444	Brassica rapa	83.96	8.00e-75	271.00
IUUC-Oba-075661	Oryza barthii	46.81	8.00e-26	108.00
IUUC-Ome-081259	Oryza meridionalis	45.83	3.00e-22	97.40

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence