iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114306

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G173600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g015120	Sb01g015120.1	Sb01g015120.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-09	39.4	161	201

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iCle+++d+   +vl+C+H fh++C++ w        ++  CP+C
   Q: 161  CPICLEEYDDEnpKIVLQCNHNFHLSCIYEW------MERSEACPVC 201
           ********6655345699*************......999999**** PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGSLLCCLRY PEDGSAPPPV CCFCLPWPFP YHGVDSGSAA RHRGDTRVAP ERGRIPLAAC 60
TSANQVDSLD TFRPPPRPLP YDDPQFSPCM LQLPVVSSGH DKASTHIQKP GQPTESKNTD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGTCCC TGCTTTGCTG CCTGCGGTAC CCGGAGGACG GCTCGGCGCC GCCGCCCGTG 60
TGCTGCTTCT GCCTACCGTG GCCTTTCCCT TACCATGGCG TCGACTCGGT ATGCTTCTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g015120

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000086	Aegilops tauschii	58.10	8.00e-51	192.00
IUUC-Bdi-014179	Brachypodium distachyon	59.81	5.00e-67	246.00
IUUC-Cme-027114	Cyanidioschyzon merolae	56.25	3.00e-18	85.10
IUUC-Lpe-050780	Leersia perrieri	55.61	2.00e-56	210.00
IUUC-Oba-075260	Oryza barthii	56.09	7.00e-59	219.00
IUUC-Obr-076469	Oryza brachyantha	57.14	3.00e-57	213.00
IUUC-Ogu-078482	Oryza glumaepatula	55.61	5.00e-55	206.00
IUUC-Oin-079123	Oryza indica	58.37	4.00e-59	219.00
IUUC-Olo-080562	Oryza longistaminata	56.84	3.00e-51	193.00
IUUC-Ome-081597	Oryza meridionalis	56.96	9.00e-59	218.00
IUUC-Oni-082856	Oryza nivara	56.52	1.00e-59	221.00
IUUC-Oru-084271	Oryza rufipogon	58.37	3.00e-60	223.00
IUUC-Osa-085761	Oryza sativa	57.92	5.00e-59	219.00
IUUC-Sit-109860	Setaria italica	83.41	6.00e-101	358.00
IUUC-Tae-123090	Triticum aestivum	54.95	2.00e-58	217.00
IUUC-Tur-125991	Triticum urartu	53.95	1.00e-54	205.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence