iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI5G15450	BRADI5G15450.1	BRADI5G15450.1
BRADI5G15450	BRADI5G15450.2	BRADI5G15450.2
BRADI5G15450	BRADI5G15450.3	BRADI5G15450.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-07	32.3	681	722

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cle +   d  ++lpC H fh++C+  w       +++ +CP+C+
   Q: 681  CAVCLENPsiGDTIRTLPCFHKFHQECIDEW------LRRKKLCPVCK 722
           ******8877555******************......9*********7 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MVDMNSDHIF EVPDTPDRIQ QSTCPVPSLA TRRGVTRAAG NPSPTRRIIF KSKSNSIQGQ 60
SSEGNAIREL PAPLDTDSIF RRAELVRLSP VTEDLEAKLS PPKLDRTTRS SVVNANGART 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTGACA TGAACTCTGA TCACATTTTT GAGGTTCCTG ACACACCTGA TCGGATACAA 60
CAGTCAACAT GTCCTGTACC AAGCTTAGCT ACTAGGAGAG GTGTAACAAG GGCGGCTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100837137

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000237	Aegilops tauschii	68.08	0.00e+00	806.00
IUUC-Atr-002738	Amborella trichopoda	52.13	1.00e-27	117.00
IUUC-Aly-006291	Arabidopsis lyrata	62.67	9.00e-27	114.00
IUUC-Ath-007110	Arabidopsis thaliana	61.33	1.00e-26	114.00
IUUC-Bol-015541	Brassica oleracea	66.67	2.00e-29	122.00
IUUC-Bra-017050	Brassica rapa	66.67	3.00e-29	122.00
IUUC-Cre-022984	Chlamydomonas reinhardtii	40.43	4.00e-17	83.60
IUUC-Gma-043843	Glycine max	62.35	3.00e-30	126.00
IUUC-Hvu-047663	Hordeum vulgare	71.47	0.00e+00	852.00
IUUC-Lpe-051616	Leersia perrieri	53.32	1.00e-167	582.00
IUUC-Mtr-057967	Medicago truncatula	62.22	3.00e-31	129.00
IUUC-Ocu-074881	Oryctolagus cuniculus	39.73	4.00e-14	72.40
IUUC-Oba-075723	Oryza barthii	58.96	0.00e+00	682.00
IUUC-Obr-076746	Oryza brachyantha	54.79	6.00e-162	563.00
IUUC-Ogl-076935	Oryza glaberrima	59.09	0.00e+00	684.00
IUUC-Ogu-077982	Oryza glumaepatula	58.82	0.00e+00	655.00
IUUC-Oin-079124	Oryza indica	58.38	0.00e+00	641.00
IUUC-Ome-081694	Oryza meridionalis	58.82	0.00e+00	676.00
IUUC-Oni-082353	Oryza nivara	58.82	0.00e+00	663.00
IUUC-Opu-083242	Oryza punctata	57.75	0.00e+00	659.00
IUUC-Oru-085078	Oryza rufipogon	58.82	0.00e+00	664.00
IUUC-Osa-086131	Oryza sativa	58.69	0.00e+00	660.00
IUUC-Oar-090427	Ovis aries	39.76	8.00e-16	78.20
IUUC-Ppa-095697	Physcomitrella patens	49.50	4.00e-25	109.00
IUUC-Ppe-101581	Prunus persica	41.35	2.00e-38	153.00
IUUC-Smo-109212	Selaginella moellendorffii	49.46	3.00e-24	105.00
IUUC-Sly-110985	Solanum lycopersicum	67.39	1.00e-36	147.00
IUUC-Stu-112544	Solanum tuberosum	66.30	3.00e-36	146.00
IUUC-Tca-121668	Theobroma cacao	43.15	2.00e-36	147.00
IUUC-Tae-124005	Triticum aestivum	73.14	0.00e+00	881.00
IUUC-Tur-126613	Triticum urartu	66.30	0.00e+00	753.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence