iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112551

Ensembl Protein ID

PGSC0003DMT400034226

UniProt Accession

M1B0C4; M1B0C4_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400013158	PGSC0003DMT400034226	PGSC0003DMT400034226

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-10	41.8	17	49

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDl 30
           gH + v ++a+   + +++vsGs D t+kvW++
   Q: 17   GHMGAVGAVALskkQQNFFVSGSSDRTLKVWNM 49
           78899999999986449**************96 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

VRLWDCENKA CVGIGIGHMG AVGAVALSKK QQNFFVSGSS DRTLKVWNMD GVTGNNEEII 60
TLKAKAVVAA HDKDINSLAV APNDSLVCSD SDGFIKLWTV RNEECIATFD QHDDKEEGVL 120

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Nucleotide Sequence
(Fasta)

GTTAGGTTAT GGGATTGCGA GAACAAGGCT TGTGTTGGCA TAGGCATAGG TCACATGGGA 60
GCTGTTGGTG CTGTTGCTTT ATCAAAGAAA CAACAGAACT TCTTCGTTAG TGGTAGTAGG 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	42.52	1.00e-59	223.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence