iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043617

UUCD1 version

UUC-GlM-01299

Ensembl Protein ID

GLYMA04G01810.2

UniProt Accession

I1JST6; I1JST6_SOYBN

Genbank Protein ID

KRH60906.1; KRH60907.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000837; CM000837

Gene Name

LOC100815928; GLYMA_04G016500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA04G01810	GLYMA04G01810.2	GLYMA04G01810.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.40e-25	89.5	29	105

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++++f+Cp+++++MrdPv+l++G+t++r++Iekw++++++      cP+t q+l++++l P+ +lr++i++w ++n+
   Q: 29   LYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECREsgrrlLCPLTLQELRSTELNPSMALRNTIEEWTARNE 105
           5899*******************************888877778*****************************9997 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MMAASWDGSS DPGSQSDDSF LERLHIEPLY DAFVCPLTKQ VMRDPVTLEN GQTFEREAIE 60
KWFKECRESG RRLLCPLTLQ ELRSTELNPS MALRNTIEEW TARNEAAQLD MARRSLNMGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATAGCTCCA TCTTCGCTCT TTCCCTTTGT CTGACCTGAT GACTATTACA ATCCAGTCAA 60
CCTTCTCTCT CTCTCTTTCT ATATATGCAT TTTCTATTAT TTTTTAAAAA CCTATTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100815928

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006004	Arabidopsis lyrata	67.13	0.00e+00	1002.00
IUUC-Ath-007153	Arabidopsis thaliana	66.79	0.00e+00	1001.00
IUUC-Bol-016384	Brassica oleracea	65.53	0.00e+00	941.00
IUUC-Bra-017058	Brassica rapa	65.91	0.00e+00	972.00
IUUC-Lpe-050971	Leersia perrieri	67.09	0.00e+00	1025.00
IUUC-Mac-064911	Musa acuminata	64.78	0.00e+00	1022.00
IUUC-Oba-075225	Oryza barthii	66.63	0.00e+00	1070.00
IUUC-Obr-076103	Oryza brachyantha	67.59	0.00e+00	1033.00
IUUC-Ogl-077529	Oryza glaberrima	66.63	0.00e+00	1068.00
IUUC-Ogu-078735	Oryza glumaepatula	66.38	0.00e+00	1066.00
IUUC-Oin-079422	Oryza indica	66.38	0.00e+00	1051.00
IUUC-Ome-081455	Oryza meridionalis	66.26	0.00e+00	1064.00
IUUC-Oni-082690	Oryza nivara	66.26	0.00e+00	1049.00
IUUC-Opu-083157	Oryza punctata	67.04	0.00e+00	1070.00
IUUC-Oru-085058	Oryza rufipogon	66.38	0.00e+00	1051.00
IUUC-Osa-086000	Oryza sativa	66.38	0.00e+00	1051.00
IUUC-Ppe-101973	Prunus persica	81.06	0.00e+00	1315.00
IUUC-Sit-110490	Setaria italica	66.63	0.00e+00	1055.00
IUUC-Tae-125341	Triticum aestivum	56.57	0.00e+00	824.00
IUUC-Tur-126573	Triticum urartu	66.26	0.00e+00	1067.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence