iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017123

Ensembl Protein ID

Bra038205.1-P

UniProt Accession

M4FAU0; M4FAU0_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra038205	Bra038205.1	Bra038205.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.70e-35	119.6	13	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceenss 74
           ++p +f+CpIslelMrdPv++++G+tydr+sIe w+++g++ tcPvtr+pl++ +l+Pn+tlrrliq+wc +n+s
   Q: 13   QIPYHFRCPISLELMRDPVTVCTGQTYDRTSIESWVSTGNNtTCPVTRAPLSDFTLIPNHTLRRLIQEWCVANRS 87
           5899********************************999888*****************************9986 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MPRSLEPLDL GIQIPYHFRC PISLELMRDP VTVCTGQTYD RTSIESWVST GNNTTCPVTR 60
APLSDFTLIP NHTLRRLIQE WCVANRSNGV ERIPTPKQPA DPTSVRALLS QASATSGAHV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGAGAA GTTTAGAGCC GTTGGATCTT GGAATCCAGA TACCGTACCA TTTCAGATGT 60
CCAATCTCAT TAGAGCTGAT GCGCGACCCA GTCACCGTCT GCACCGGTCA AACCTACGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000645	Aegilops tauschii	45.26	1.00e-73	270.00
IUUC-Atr-002952	Amborella trichopoda	54.52	2.00e-102	365.00
IUUC-Aly-006085	Arabidopsis lyrata	85.50	1.00e-162	565.00
IUUC-Ath-006933	Arabidopsis thaliana	85.38	2.00e-176	611.00
IUUC-Bdi-014994	Brachypodium distachyon	44.58	2.00e-66	246.00
IUUC-Bol-015539	Brassica oleracea	99.04	0.00e+00	704.00
IUUC-Hvu-047378	Hordeum vulgare	44.79	2.00e-74	272.00
IUUC-Ppa-095941	Physcomitrella patens	37.32	8.00e-62	230.00
IUUC-Smo-108904	Selaginella moellendorffii	45.45	7.00e-77	280.00
IUUC-Stu-112274	Solanum tuberosum	66.43	6.00e-147	513.00
IUUC-Sbi-114366	Sorghum bicolor	44.37	2.00e-66	246.00
IUUC-Tae-123086	Triticum aestivum	45.26	1.00e-73	270.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence