iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111810

Ensembl Protein ID

Solyc01g107980.2.1

UniProt Accession

K4B314; K4B314_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g107980.2	Solyc01g107980.2.1	Solyc01g107980.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.20e-35	122.1	13	85

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           ++p +f+CpIslelMrdPv++++G+tydr+sIe w+a+g++tcPvtr+pl++ +l+Pn+tlrrliq+wc +n+
   Q: 13   QIPYHFRCPISLELMRDPVTVCTGQTYDRQSIESWVATGNTTCPVTRAPLSDFTLIPNHTLRRLIQEWCVANR 85
           5899*****************************************************************9986 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MPASLDPLDV GVQIPYHFRC PISLELMRDP VTVCTGQTYD RQSIESWVAT GNTTCPVTRA 60
PLSDFTLIPN HTLRRLIQEW CVANRAFGVE RIPTPKQPAD PSLVRSLLNQ AAAQSNHMNS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGGGTATG TCCCTCTGTT TTCTCTCCGT ATAAGACCCA GCAAATTCCC AAACAAAACT 60
GAAACAGAAT TTGCAGACTC TCTTTCAGTT TTAGCTTTTT CTATATCTAT ATATAAAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sly:101261465

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000645	Aegilops tauschii	49.88	5.00e-78	283.00
IUUC-Atr-002952	Amborella trichopoda	57.18	5.00e-114	403.00
IUUC-Aly-005606	Arabidopsis lyrata	66.27	4.00e-140	490.00
IUUC-Ath-006933	Arabidopsis thaliana	65.01	1.00e-131	462.00
IUUC-Bdi-014994	Brachypodium distachyon	64.47	2.00e-52	198.00
IUUC-Bol-015539	Brassica oleracea	68.32	1.00e-133	469.00
IUUC-Bra-017533	Brassica rapa	67.06	2.00e-137	481.00
IUUC-Gma-044197	Glycine max	74.34	1.00e-171	594.00
IUUC-Hvu-047378	Hordeum vulgare	49.88	8.00e-79	286.00
IUUC-Lpe-050781	Leersia perrieri	67.95	4.00e-54	204.00
IUUC-Mtr-058307	Medicago truncatula	71.64	5.00e-155	539.00
IUUC-Mac-064526	Musa acuminata	51.27	1.00e-62	232.00
IUUC-Oba-075168	Oryza barthii	84.16	1.00e-48	184.00
IUUC-Obr-076528	Oryza brachyantha	80.77	1.00e-48	186.00
IUUC-Ogl-077566	Oryza glaberrima	62.66	4.00e-51	194.00
IUUC-Ogu-078818	Oryza glumaepatula	62.66	5.00e-51	193.00
IUUC-Oni-082172	Oryza nivara	62.66	3.00e-51	194.00
IUUC-Opu-083930	Oryza punctata	64.97	2.00e-54	205.00
IUUC-Oru-084509	Oryza rufipogon	62.66	3.00e-51	194.00
IUUC-Osa-085902	Oryza sativa	62.66	3.00e-51	194.00
IUUC-Pop-100012	Populus trichocarpa	76.63	3.00e-167	580.00
IUUC-Ppe-101571	Prunus persica	74.76	7.00e-156	542.00
IUUC-Smo-108904	Selaginella moellendorffii	48.74	3.00e-71	261.00
IUUC-Sit-110186	Setaria italica	64.90	7.00e-52	197.00
IUUC-Stu-112274	Solanum tuberosum	97.11	0.00e+00	746.00
IUUC-Sbi-114366	Sorghum bicolor	63.58	7.00e-54	203.00
IUUC-Tca-121177	Theobroma cacao	74.52	0.00e+00	625.00
IUUC-Tae-123086	Triticum aestivum	49.88	5.00e-78	283.00
IUUC-Tur-126112	Triticum urartu	49.88	3.00e-78	284.00
IUUC-Vvi-131329	Vitis vinifera	76.39	1.00e-173	601.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence