iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095562

Ensembl Protein ID

PP1S17_107V6.1

UniProt Accession

A9RMF9; A9RMF9_PHYPA

Genbank Protein ID

EDQ79859.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544906

Gene Name

PHYPADRAFT_159972

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S17_107V6	PP1S17_107V6.1	PP1S17_107V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-26	91.7	321	354
UBD/Beta-Prp	3.70e-55	188.0	122	397

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           t+  f  d ++++s++ D +i++W++ tg+++ks
   Q: 321  TSATFtKDqRYVLSCGKDSQIRLWEVGTGRQVKS 354
           5666787779********************9986 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkl................lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgk 85
           ++hk+  +c  fspd++l+atgs+d +ik+++v++                   +r++++h +++++++f+p+ +il++g++Drtik +d+ ++ 
   Q: 122  SEHKNMARCARFSPDGRLVATGSADTSIKLFEVDKVRQmlvadggnrespirpvIRTFYDHLQPINDLDFHPQMSILISGAKDRTIKFFDFAKSA 216
           57999*****************************977699*************************************************999666 PP
   S: 86   cvhtlk..ghedsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl 175
             ++++  + +++v+s++f+p gd+l++G+++ +++++d++t qc+ +    +s   g++n v+++ +g l+v++s+D+ vr+Wd  +++++r  
   Q: 217  ARRAVRviQDTHNVRSVAFHPCGDYLLAGTDHPIAHLYDVSTFQCYLSsslQDSHVGGAINQVRYSANGGLYVTASKDGSVRIWDGLNAQCVRAI 311
           666655556**************************************99977777789************************************* PP
   S: 176  tggh.tdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlng.htdnvksvrfspnderlvsgssDgsiri..Wdlrsgdll 257
           t +h t   +s +f++++++++s+++d++++lw++ tg+ v++++g +  ++++ + ++++e ++   ++ +  i  Wd+ +g+++
   Q: 312  TCAHgTTEATSATFTKDQRYVLSCGKDSQIRLWEVGTGRQVKSYQGaQHHQMRCQAIFNHTEEFILSIDEAQNEIvaWDSLTGEIV 397
           7766367789999********************************95457888888887766666666666666666**9999875 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MGSDAEHQYD GALQRHVMAL IVAHLRDHNL NQAALAVSNA TMTPLQSDVP PHKLLDLVRK 60
GLAVDRDDAV PAPTIDNNGS GASLAGYGPL PAVPRTSLDF SSVQATKGTS KTFAKFESRH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTCTGTGTG GGACGCGCCT CGCAGAGCAC TACCCAGAAT TTGGAATTTT CAGTTGCGAG 60
GCGGAGGAGC ACTCTCTGGA TGCCCGTTTG AGGGTGGACG AGGCCTGGGC AGTGGAATGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_159972

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002163	Ailuropoda melanoleuca	35.94	1.00e-80	292.00
IUUC-Atr-002687	Amborella trichopoda	60.12	3.00e-173	600.00
IUUC-Apl-003438	Anas platyrhynchos	36.18	2.00e-81	295.00
IUUC-Aca-005178	Anolis carolinensis	36.64	2.00e-81	295.00
IUUC-Aly-005791	Arabidopsis lyrata	61.25	6.00e-156	543.00
IUUC-Ath-006689	Arabidopsis thaliana	60.94	2.00e-154	537.00
IUUC-Ame-011217	Astyanax mexicanus	43.73	4.00e-67	247.00
IUUC-Bta-012619	Bos taurus	35.94	9.00e-81	293.00
IUUC-Bdi-014515	Brachypodium distachyon	63.08	2.00e-152	530.00
IUUC-Bra-017450	Brassica rapa	53.03	2.00e-136	478.00
IUUC-Cel-018151	Caenorhabditis elegans	39.15	8.00e-71	260.00
IUUC-Cja-019304	Callithrix jacchus	35.94	6.00e-81	293.00
IUUC-Cfa-020208	Canis familiaris	35.94	1.00e-80	292.00
IUUC-Cpo-022245	Cavia porcellus	35.94	1.00e-80	292.00
IUUC-Csa-023066	Chlorocebus sabaeus	35.94	6.00e-81	293.00
IUUC-Cho-024770	Choloepus hoffmanni	40.46	3.00e-79	287.00
IUUC-Cin-025621	Ciona intestinalis	38.59	2.00e-71	261.00
IUUC-Csv-026071	Ciona savignyi	38.33	5.00e-78	284.00
IUUC-Dre-028254	Danio rerio	35.94	6.00e-78	283.00
IUUC-Dno-029903	Dasypus novemcinctus	35.94	1.00e-80	292.00
IUUC-Dor-030423	Dipodomys ordii	36.18	2.00e-80	292.00
IUUC-Dme-031993	Drosophila melanogaster	41.05	1.00e-72	266.00
IUUC-Eca-033316	Equus caballus	35.94	1.00e-80	292.00
IUUC-Eeu-035001	Erinaceus europaeus	36.28	4.00e-80	291.00
IUUC-Fca-036447	Felis catus	35.94	1.00e-80	292.00
IUUC-Fal-037601	Ficedula albicollis	36.18	2.00e-81	295.00
IUUC-Gmo-038531	Gadus morhua	35.12	8.00e-75	273.00
IUUC-Gga-040869	Gallus gallus	36.18	7.00e-82	296.00
IUUC-Gac-042380	Gasterosteus aculeatus	36.03	1.00e-78	286.00
IUUC-Gma-043478	Glycine max	66.51	3.00e-174	603.00
IUUC-Ggo-045302	Gorilla gorilla	35.94	6.00e-81	293.00
IUUC-Hsa-045678	Homo sapiens	35.94	6.00e-81	293.00
IUUC-Hvu-047301	Hordeum vulgare	63.68	4.00e-150	523.00
IUUC-Itr-048259	Ictidomys tridecemlineatus	35.94	1.00e-80	292.00
IUUC-Lch-050319	Latimeria chalumnae	36.83	1.00e-81	296.00
IUUC-Lpe-051440	Leersia perrieri	51.19	2.00e-131	461.00
IUUC-Loc-052035	Lepisosteus oculatus	37.53	2.00e-81	295.00
IUUC-Laf-054275	Loxodonta africana	35.94	1.00e-80	292.00
IUUC-Mcc-055857	Macaca mulatta	32.41	2.00e-60	225.00
IUUC-Mtr-058667	Medicago truncatula	64.86	1.00e-165	575.00
IUUC-Mga-059710	Meleagris gallopavo	36.18	7.00e-82	296.00
IUUC-Mmr-060604	Microcebus murinus	35.94	1.00e-80	292.00
IUUC-Mdo-062953	Monodelphis domestica	35.94	2.00e-80	292.00
IUUC-Mmu-064292	Mus musculus	36.18	9.00e-81	293.00
IUUC-Mac-064568	Musa acuminata	73.33	4.00e-150	523.00
IUUC-Mpu-066294	Mustela putorius furo	43.19	3.00e-50	191.00
IUUC-Mlu-067279	Myotis lucifugus	35.96	9.00e-81	293.00
IUUC-Nle-069322	Nomascus leucogenys	35.94	6.00e-81	293.00
IUUC-Opr-070580	Ochotona princeps	35.94	1.00e-80	293.00
IUUC-Ont-072554	Oreochromis niloticus	36.60	6.00e-80	290.00
IUUC-Oan-072856	Ornithorhynchus anatinus	36.18	4.00e-81	294.00
IUUC-Ocu-074150	Oryctolagus cuniculus	35.03	1.00e-64	239.00
IUUC-Oba-075585	Oryza barthii	55.90	8.00e-142	496.00
IUUC-Obr-076069	Oryza brachyantha	63.39	2.00e-148	518.00
IUUC-Ogl-077045	Oryza glaberrima	63.11	3.00e-158	550.00
IUUC-Ogu-078697	Oryza glumaepatula	62.80	1.00e-151	530.00
IUUC-Oin-080119	Oryza indica	63.11	3.00e-158	550.00
IUUC-Olo-081093	Oryza longistaminata	49.69	8.00e-88	318.00
IUUC-Ome-081718	Oryza meridionalis	53.36	2.00e-124	439.00
IUUC-Oni-082072	Oryza nivara	55.90	8.00e-142	496.00
IUUC-Opu-084080	Oryza punctata	53.61	3.00e-117	414.00
IUUC-Oru-085070	Oryza rufipogon	58.45	9.00e-142	497.00
IUUC-Osa-086149	Oryza sativa	63.11	3.00e-158	550.00
IUUC-Ola-086697	Oryzias latipes	36.36	7.00e-79	286.00
IUUC-Oga-088697	Otolemur garnettii	35.94	1.00e-80	292.00
IUUC-Oar-089774	Ovis aries	35.94	1.00e-80	292.00
IUUC-Ptr-090924	Pan troglodytes	35.94	6.00e-81	293.00
IUUC-Pan-092373	Papio anubis	35.94	8.00e-81	293.00
IUUC-Psi-094001	Pelodiscus sinensis	36.18	5.00e-81	294.00
IUUC-Pma-094274	Petromyzon marinus	36.87	1.00e-76	279.00
IUUC-Pfo-097235	Poecilia formosa	36.60	4.00e-79	287.00
IUUC-Pab-098608	Pongo abelii	35.94	6.00e-81	293.00
IUUC-Pca-100268	Procavia capensis	35.94	9.00e-81	293.00
IUUC-Ppe-101425	Prunus persica	66.90	2.00e-173	600.00
IUUC-Pva-103183	Pteropus vampyrus	35.94	1.00e-80	292.00
IUUC-Rno-105097	Rattus norvegicus	36.18	9.00e-81	293.00
IUUC-Sha-107642	Sarcophilus harrisii	35.94	2.00e-80	292.00
IUUC-Smo-108680	Selaginella moellendorffii	67.69	4.00e-175	606.00
IUUC-Sit-110471	Setaria italica	63.26	2.00e-156	545.00
IUUC-Sly-111143	Solanum lycopersicum	63.49	3.00e-88	317.00
IUUC-Stu-111926	Solanum tuberosum	72.67	6.00e-72	261.00
IUUC-Sar-112947	Sorex araneus	40.52	3.00e-63	234.00
IUUC-Sbi-113769	Sorghum bicolor	62.44	2.00e-150	525.00
IUUC-Ssc-115736	Sus scrofa	35.94	1.00e-80	292.00
IUUC-Tgu-117457	Taeniopygia guttata	36.18	2.00e-81	295.00
IUUC-Tru-117760	Takifugu rubripes	36.34	7.00e-81	293.00
IUUC-Tsy-118943	Tarsius syrichta	35.25	2.00e-76	278.00
IUUC-Tni-120081	Tetraodon nigroviridis	36.11	3.00e-80	291.00
IUUC-Tca-121190	Theobroma cacao	67.99	2.00e-177	613.00
IUUC-Tae-123709	Triticum aestivum	64.15	2.00e-152	531.00
IUUC-Tur-126329	Triticum urartu	66.86	9.00e-144	503.00
IUUC-Tbe-127878	Tupaia belangeri	35.71	3.00e-79	288.00
IUUC-Ttr-128985	Tursiops truncatus	35.94	1.00e-80	292.00
IUUC-Vpa-130147	Vicugna pacos	35.94	7.00e-81	293.00
IUUC-Vvi-130935	Vitis vinifera	67.76	0.00e+00	636.00
IUUC-Xtr-132482	Xenopus tropicalis	36.41	5.00e-81	293.00
IUUC-Xma-133929	Xiphophorus maculatus	36.60	4.00e-79	287.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence