iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d004659	Zm00001d004659_T005	Zm00001d004659_T005
Zm00001d004659	Zm00001d004659_T001	Zm00001d004659_T001
Zm00001d004659	Zm00001d004659_T011	Zm00001d004659_T011
Zm00001d004659	Zm00001d004659_T002	Zm00001d004659_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.40e-107	361.8	389	963

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw.kskkkavsprellkalkkeaeefsgyeq 89
           tGl NlgNtCYmNS++QcL+++p++++++ e +++++n++np ++ gel+ ++ +l+++lw  + +  vspr ++ +l+++a++fsgy+q
   Q: 389  TGLLNLGNTCYMNSAIQCLVHTPQFTKYFCEDYHREINRQNPLGNVGELALAFGELLRKLWaPGGRAPVSPRPFKMKLSRFASQFSGYNQ 478
           7************************************************************999999*********************** PP
   S: 90   qDaqEflaflldqleeelkkeknkpkeeeeeed...kselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpv 176
           +D+qE+laflld+l+e+l++ k+ p+ ++ ++d   ++e  de + ++  +n+s+i+d+ qgq+ks+++c+ c++vs++++pf++lslp+
   Q: 479  HDSQELLAFLLDGLHEDLNRVKHRPYINSGDADgrsDEEVADEYWANHIARNNSIIVDVCQGQYKSTLVCPVCGKVSVTFDPFMYLSLPL 568
           ********************99988877655441116677777*********************************************** PP
   S: 177  pgkeetkke................................................................................. 185
           +  ++++ +                                                                                 
   Q: 569  QFASTRSVTavvfscdgsvpptpftvnvpkqgrcrdllqalgaacslkngeklliaeirnhkiyrfiddpvlqlstisdddhlavyklpk 658
           ****99888********************************************************************************* PP
   S: 186  .......................................................................................... 185
                                                                                                     
   Q: 659  lekrvnyiqfvhrhedldhgnnnsltswkpygvpllaqisrneivtgfdihelvhkmlvpvlrnpdslhlavqssvstrthsyhtdsskc 748
           ****************************************************************************************** PP
   S: 186  ....................................................................slqdcLesftkeeelegenkyy 207
                                                                               sl  cL++f +ee l  e+++y
   Q: 749  qlllvddsntvieksndairipqsslatvffinwpkadlkkidthhleylpevfmyappakrtrgealSLYACLDAFLREEPLVPEDMWY 838
           ****************************************************************************************** PP
   S: 208  cekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefple.LdlspfctspeekqkekkkYeLiavvvHsGslssGHYv 296
           c++ck++++a+kkl+l++lPevL++hLkRfsfs++   ++k+++ v+fp++ Ldl+++ +++++++  +++YeL+av +H+G++ sGHY+
   Q: 839  CPRCKEQRQASKKLDLWRLPEVLVIHLKRFSFSRS--TKQKLETFVNFPIHdLDLTNYIANKKTSE--RQIYELYAVSNHYGNMASGHYT 924
           ******************************99885..778*********************88877..9********************* PP
   S: 297  ayvkn.ekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           a++k  ++++W++fdDs+V +++e+ev++   + aYvlfY+r
   Q: 925  AHIKLvDENRWYNFDDSHVASIDEDEVKT---AAAYVLFYRR 963
           ****945566*******************...********98 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MEMVVAAPAL PAEVERALIR DITVAADAHA KEGDTFFLIT TRSTMPLCSP FRCILIPVDL 60
LPDSIPVRVA TLGRVPRGAR SFFPLLAGVV CWWRNASAPP LRLRLGVGIG VRIINAIFFF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACGAGGGGA GGGTGCAAAC CCTAGCCGTA GACCGCGGGC TCCTCCTCCT CGCCGGCGGC 60
GGCGGGGATG GAGATGGTGG TGGCGGCGCC GGCGCTCCCC GCCGAAGTGG AGAGGGCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR006615--Pept_C19_DUSP
IPR001394--Peptidase_C19_UCH
IPR029346--USP_C
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS51283--DUSP
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF06337--DUSP
PF00443--UCH
PF14533--USP7_C2

SMART

SM00695--DUSP

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002675	Amborella trichopoda	59.31	0.00e+00	981.00
IUUC-Aly-005644	Arabidopsis lyrata	57.67	0.00e+00	986.00
IUUC-Ath-006782	Arabidopsis thaliana	57.89	0.00e+00	976.00
IUUC-Bdi-014523	Brachypodium distachyon	78.68	0.00e+00	1424.00
IUUC-Bol-016335	Brassica oleracea	57.61	0.00e+00	966.00
IUUC-Bra-016930	Brassica rapa	57.13	0.00e+00	962.00
IUUC-Gma-043037	Glycine max	59.69	0.00e+00	1055.00
IUUC-Hvu-047686	Hordeum vulgare	79.87	0.00e+00	753.00
IUUC-Lpe-050892	Leersia perrieri	77.12	0.00e+00	1348.00
IUUC-Mtr-058563	Medicago truncatula	59.10	0.00e+00	1044.00
IUUC-Mmu-063241	Mus musculus	32.07	5.00e-113	401.00
IUUC-Mac-065239	Musa acuminata	66.27	0.00e+00	1160.00
IUUC-Oba-074976	Oryza barthii	79.58	0.00e+00	1316.00
IUUC-Obr-076301	Oryza brachyantha	78.92	0.00e+00	1400.00
IUUC-Ogu-078386	Oryza glumaepatula	79.47	0.00e+00	1315.00
IUUC-Oin-080145	Oryza indica	79.39	0.00e+00	1351.00
IUUC-Olo-080452	Oryza longistaminata	79.47	0.00e+00	1320.00
IUUC-Ome-081929	Oryza meridionalis	80.36	0.00e+00	1288.00
IUUC-Oni-083100	Oryza nivara	73.55	0.00e+00	1209.00
IUUC-Opu-083518	Oryza punctata	79.37	0.00e+00	1326.00
IUUC-Oru-084337	Oryza rufipogon	78.71	0.00e+00	1326.00
IUUC-Pop-099866	Populus trichocarpa	59.42	0.00e+00	1046.00
IUUC-Ppe-101550	Prunus persica	59.69	0.00e+00	1038.00
IUUC-Smo-108736	Selaginella moellendorffii	52.50	2.00e-159	555.00
IUUC-Sit-110601	Setaria italica	88.63	0.00e+00	1315.00
IUUC-Sly-111726	Solanum lycopersicum	58.30	0.00e+00	995.00
IUUC-Sar-113542	Sorex araneus	36.12	5.00e-81	295.00
IUUC-Tca-121726	Theobroma cacao	60.09	0.00e+00	1003.00
IUUC-Tae-125515	Triticum aestivum	76.88	0.00e+00	1361.00
IUUC-Tur-126392	Triticum urartu	75.20	0.00e+00	1307.00
IUUC-Tme-127062	Tuber melanosporum	31.06	3.00e-99	356.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence