iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131657

UUCD1 version

UUC-ViV-00563

Ensembl Protein ID

VIT_12s0028g03570.t01

UniProt Accession

F6H5D9; F6H5D9_VITVI

Genbank Protein ID

CCB47288.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595235

Gene Name

VIT_12s0028g03570

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_12s0028g03570	VIT_12s0028g03570.t01	VIT_12s0028g03570.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.00e-28	95.9	674	710

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvl 35
           H+ +v++++f   d t l+sG+dDg +k+W++ +g +
   Q: 674  HEKRVWSVDFslADpTKLASGGDDGAVKLWNINQGGS 710
           9999********666****************988765 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MYSIVLWCFD LEETGSISPF PRTVFSGDTS DNLRCLFRKS ESQQVRPSCA DLNDNPLGFS 60
GACEDEMEEG HTVRGVERGH VSLRRWLDKP NRSVDLLECL HIFRQIVEIV NLAHSQGVVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTATTCAA TCGTTCTCTG GTGCTTTGAT TTAGAGGAGA CAGGGAGCAT TTCGCCGTTC 60
CCGAGGTTCG TTTTGATATC TGTTATACAT TTTTCTTTTT AATATGAAGG TTTTGTTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011009--Kinase-like_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014444	Brachypodium distachyon	61.84	0.00e+00	776.00
IUUC-Bol-016003	Brassica oleracea	56.83	0.00e+00	865.00
IUUC-Bra-017508	Brassica rapa	55.61	0.00e+00	820.00
IUUC-Cho-024883	Choloepus hoffmanni	32.48	4.00e-41	162.00
IUUC-Hvu-047820	Hordeum vulgare	62.35	0.00e+00	796.00
IUUC-Lpe-051099	Leersia perrieri	62.54	0.00e+00	766.00
IUUC-Mac-065222	Musa acuminata	57.93	0.00e+00	832.00
IUUC-Oba-075434	Oryza barthii	62.95	0.00e+00	784.00
IUUC-Obr-076666	Oryza brachyantha	63.79	0.00e+00	796.00
IUUC-Ogl-077203	Oryza glaberrima	63.62	0.00e+00	791.00
IUUC-Ogu-078753	Oryza glumaepatula	57.32	0.00e+00	735.00
IUUC-Oin-079226	Oryza indica	60.80	0.00e+00	744.00
IUUC-Oni-082327	Oryza nivara	62.82	0.00e+00	783.00
IUUC-Opu-083945	Oryza punctata	63.01	0.00e+00	773.00
IUUC-Oru-085079	Oryza rufipogon	62.82	0.00e+00	782.00
IUUC-Olu-087702	Ostreococcus lucimarinus	46.45	1.00e-78	285.00
IUUC-Sit-110040	Setaria italica	62.76	0.00e+00	752.00
IUUC-Sbi-114141	Sorghum bicolor	62.67	0.00e+00	787.00
IUUC-Tae-125217	Triticum aestivum	62.31	0.00e+00	775.00
IUUC-Tur-126499	Triticum urartu	61.27	0.00e+00	737.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence