iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-043653

Ensembl Protein ID

GLYMA20G33180.2

UniProt Accession

I1NHQ6; I1NHQ6_SOYBN

Genbank Protein ID

KRG92088.1; KRG92089.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000853; CM000853

Gene Name

LOC100803472; GLYMA_20G190300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA20G33180	GLYMA20G33180.2	GLYMA20G33180.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.40e-09	37.0	159	194

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           H++ v++++f  d  +l+s s Dg+ ++W + +gv+l
   Q: 159  HKS-VRDMDFsLDsEFLASTSTDGSARIWKIEDGVPL 194
           666.9******555******************99986 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MGNDAGSPQG PVTCGSWIRR PENLNLVVLG RSRRGNSCPS LLEIFSFDPK TTSLSTCPLT 60
TYVLEAEEGD PVAIAVHPSG DDFVCALSNG SCKLFELYGR ETNMKLLAKE LAPLQGIGPQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGAATCTT AAGCGAATAT CTCCATAGTT GCTAATATGT TTTGTTTCTT CCAGCATTGT 60
TGCATTTACT GGACCCATCT CTCCCTTCTT TCTATTAAAC AAATCGCTTC AATTTTTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030176--C:integral component of endoplasmic reticulum membrane
GO:0005096--F:GTPase activator activity
GO:0051020--F:GTPase binding
GO:0005090--F:Sar guanyl-nucleotide exchange factor activity
GO:0009306--P:protein secretion
GO:0003400--P:regulation of COPII vesicle coating

KEGG

gmx:100803472

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000155	Aegilops tauschii	55.40	3.00e-103	368.00
IUUC-Mtr-058623	Medicago truncatula	86.80	0.00e+00	720.00
IUUC-Oba-075552	Oryza barthii	58.22	7.00e-129	453.00
IUUC-Ogl-077345	Oryza glaberrima	58.22	7.00e-129	453.00
IUUC-Ogu-078334	Oryza glumaepatula	58.22	7.00e-129	453.00
IUUC-Olo-080918	Oryza longistaminata	58.22	3.00e-128	451.00
IUUC-Ome-081986	Oryza meridionalis	58.22	9.00e-129	453.00
IUUC-Ppa-095904	Physcomitrella patens	40.58	1.00e-64	239.00
IUUC-Ppe-101362	Prunus persica	77.64	1.00e-172	599.00
IUUC-Smo-108754	Selaginella moellendorffii	46.77	2.00e-71	262.00
IUUC-Tca-121608	Theobroma cacao	73.52	5.00e-172	597.00
IUUC-Tae-124657	Triticum aestivum	56.53	4.00e-108	384.00
IUUC-Tur-126597	Triticum urartu	59.33	3.00e-88	318.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence