iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-091312

Ensembl Protein ID

ENSPTRP00000002441.4

UniProt Accession

H2Q089; H2Q089_PANTR

Genbank Protein ID

JAA13653.1; JAA28826.1; JAA38371.1

Protein Name

Ubiquilin 4

Genbank Nucleotide ID

AACZ03005032; GABD01004274; GABE01006368

Gene Name

UBQLN4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000001444.5	ENSPTRT00000002656.4	ENSPTRP00000002441.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.30e-10	41.1	559	596
ULD/UDP/UBQ/UBQ_PIM	1.10e-22	79.8	13	86

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGF.dreealqaLraannnleaAveyLl 39
           ++++leql +MGF +re++lqaL a++++++aA+e+Ll
   Q: 559  FQQQLEQLNSMGFiNREANLQALIATGGDINAAIERLL 596
           799**********************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           +++tvkt+k+ke e+ +    +v+e+Ke+i+++++ +++q+ LI+aGkiLkD +tL+++gikdg +vhlv+k+++
   Q: 13   IRVTVKTPKDKE-EIVICDRASVKEFKEEISRRFKAQQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQ 86
           68**********.***********************************************************987 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MAEPSGAETR PPIRVTVKTP KDKEEIVICD RASVKEFKEE ISRRFKAQQD QLVLIFAGKI 60
LKDGDTLNQH GIKDGLTVHL VIKTPQKAQD PAAATASSPS TPDPASAPST TPASPATPAQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGCGGCCGG GTGGCGGCGG CGGCATGGCG GAGCCGAGCG GGGCCGAGAC GAGGCCCCCC 60
ATTCGGGTCA CCGTCAAGAC CCCCAAGGAC AAGGAGGAAA TTGTGATCTG CGATCGAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR015496--Ubiquilin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005776--C:autophagosome
GO:0031597--C:cytosolic proteasome complex
GO:0005789--C:endoplasmic reticulum membrane
GO:0031595--C:nuclear proteasome complex
GO:1901097--P:negative regulation of autophagosome maturation
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process

KEGG

ptr:457380

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001730	Ailuropoda melanoleuca	88.14	2.00e-158	551.00
IUUC-Apl-004150	Anas platyrhynchos	88.00	1.00e-159	556.00
IUUC-Ath-007271	Arabidopsis thaliana	39.05	4.00e-43	169.00
IUUC-Afl-008403	Aspergillus flavus	33.33	6.00e-08	52.00
IUUC-Afu-009029	Aspergillus fumigatus	35.71	4.00e-08	52.40
IUUC-Ani-009418	Aspergillus nidulans	38.10	5.00e-08	52.40
IUUC-Ang-009826	Aspergillus niger	26.57	5.00e-09	55.10
IUUC-Aor-010091	Aspergillus oryzae	33.33	6.00e-08	52.00
IUUC-Ate-010419	Aspergillus terreus	34.52	1.00e-07	50.80
IUUC-Ame-011329	Astyanax mexicanus	71.13	4.00e-168	584.00
IUUC-Bta-012938	Bos taurus	96.95	4.00e-165	574.00
IUUC-Bdi-014265	Brachypodium distachyon	33.72	2.00e-49	190.00
IUUC-Cja-018858	Callithrix jacchus	99.56	4.00e-175	607.00
IUUC-Cfa-020455	Canis familiaris	96.48	9.00e-169	586.00
IUUC-Cpo-021410	Cavia porcellus	94.37	4.00e-163	567.00
IUUC-Cme-027155	Cyanidioschyzon merolae	48.94	2.00e-34	140.00
IUUC-Dre-028009	Danio rerio	75.99	1.00e-150	526.00
IUUC-Dno-029892	Dasypus novemcinctus	98.36	3.00e-163	568.00
IUUC-Eca-034284	Equus caballus	99.06	4.00e-170	591.00
IUUC-Fca-036145	Felis catus	81.35	3.00e-125	442.00
IUUC-Fal-037180	Ficedula albicollis	88.47	3.00e-158	551.00
IUUC-Fox-037726	Fusarium oxysporum	50.00	7.00e-07	48.50
IUUC-Gmo-039317	Gadus morhua	70.75	3.00e-146	511.00
IUUC-Ggr-039961	Gaeumannomyces graminis	50.00	9.00e-07	48.10
IUUC-Gga-041050	Gallus gallus	88.24	9.00e-151	526.00
IUUC-Gac-041826	Gasterosteus aculeatus	71.40	2.00e-149	522.00
IUUC-Ggo-044680	Gorilla gorilla	100.00	6.00e-171	593.00
IUUC-Hsa-046554	Homo sapiens	99.77	4.00e-171	594.00
IUUC-Itr-048781	Ictidomys tridecemlineatus	97.18	4.00e-169	587.00
IUUC-Lch-049480	Latimeria chalumnae	74.71	3.00e-140	492.00
IUUC-Loc-051845	Lepisosteus oculatus	72.87	2.00e-137	482.00
IUUC-Laf-054476	Loxodonta africana	98.59	1.00e-173	602.00
IUUC-Mcc-054765	Macaca mulatta	100.00	2.00e-171	595.00
IUUC-Meu-056843	Macropus eugenii	91.44	3.00e-166	578.00
IUUC-Mor-057194	Magnaporthe oryzae	50.00	3.00e-07	49.70
IUUC-Mpo-057467	Magnaporthe poae	50.00	3.00e-07	47.00
IUUC-Mla-058987	Melampsora laricipopulina	53.49	4.00e-07	49.30
IUUC-Mga-059730	Meleagris gallopavo	88.24	2.00e-157	549.00
IUUC-Mvi-060466	Microbotryum violaceum	54.76	3.00e-08	53.10
IUUC-Mmr-061256	Microcebus murinus	98.83	2.00e-179	622.00
IUUC-Mdo-061917	Monodelphis domestica	90.33	8.00e-167	580.00
IUUC-Mmu-063397	Mus musculus	94.84	1.00e-176	612.00
IUUC-Mpu-066300	Mustela putorius furo	96.24	4.00e-174	604.00
IUUC-Mlu-067197	Myotis lucifugus	94.84	2.00e-163	568.00
IUUC-Nfi-068487	Neosartorya fischeri	35.71	2.00e-08	53.50
IUUC-Ncr-068732	Neurospora crassa	50.00	2.00e-07	50.10
IUUC-Opr-070323	Ochotona princeps	94.85	5.00e-170	590.00
IUUC-Ont-072038	Oreochromis niloticus	74.53	1.00e-150	526.00
IUUC-Ocu-074759	Oryctolagus cuniculus	98.12	1.00e-163	569.00
IUUC-Ola-086802	Oryzias latipes	67.64	9.00e-145	506.00
IUUC-Oga-088466	Otolemur garnettii	97.65	2.00e-166	579.00
IUUC-Oar-090375	Ovis aries	96.95	3.00e-164	571.00
IUUC-Pan-092351	Papio anubis	100.00	2.00e-171	595.00
IUUC-Psi-093262	Pelodiscus sinensis	87.50	0.00e+00	662.00
IUUC-Pno-094908	Phaeosphaeria nodorum	34.88	4.00e-07	48.10
IUUC-Ppa-095702	Physcomitrella patens	37.71	7.00e-42	164.00
IUUC-Pab-097627	Pongo abelii	96.71	3.00e-170	591.00
IUUC-Pca-100181	Procavia capensis	93.36	4.00e-104	371.00
IUUC-Pva-102687	Pteropus vampyrus	84.04	6.00e-137	480.00
IUUC-Ptt-103817	Puccinia triticina	51.22	2.00e-06	46.20
IUUC-Rno-105804	Rattus norvegicus	90.68	0.00e+00	742.00
IUUC-Sha-107346	Sarcophilus harrisii	89.98	8.00e-165	573.00
IUUC-Ssl-108425	Sclerotinia sclerotiorum	50.00	6.00e-07	48.10
IUUC-Smo-109502	Selaginella moellendorffii	31.18	7.00e-39	154.00
IUUC-Sly-111731	Solanum lycopersicum	55.37	3.00e-36	146.00
IUUC-Stu-112263	Solanum tuberosum	55.37	3.00e-36	146.00
IUUC-Sbi-114273	Sorghum bicolor	53.28	1.00e-35	144.00
IUUC-Ssc-116185	Sus scrofa	99.30	1.00e-165	576.00
IUUC-Tgu-116930	Taeniopygia guttata	88.24	1.00e-156	546.00
IUUC-Tru-118652	Takifugu rubripes	73.89	6.00e-148	517.00
IUUC-Tsy-118798	Tarsius syrichta	98.67	9.00e-100	356.00
IUUC-Tre-122085	Trichoderma reesei	48.84	3.00e-07	49.30
IUUC-Tvi-122381	Trichoderma virens	47.73	6.00e-07	48.50
IUUC-Ttr-128771	Tursiops truncatus	98.83	5.00e-172	597.00
IUUC-Vpa-130633	Vicugna pacos	78.79	3.00e-106	378.00
IUUC-Xtr-132978	Xenopus tropicalis	84.62	2.00e-119	422.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence