iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115544

Ensembl Protein ID

ENSSSCP00000008222.2

UniProt Accession

F1RKC2; F1RKC2_PIG

Protein Name

Uncharacterized protein

Gene Name

RHBDD2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000007698.2	ENSSSCT00000008441.2	ENSSSCP00000008222.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	26.71	1.00e-05	47.40	IUUC-Osa-086297

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

ASGPSMESLL HLWPLVPSAT FFTALLSLLV SGPRLFLLQX SLRSEALRNW QVYRLVTYIF 60
VYENPVSLLC GAIIIWRFAG NFERTVGTVR HCFFTVIFAL CSAIIFLSFE AVSKLSKLGE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGTCAGGGC CTTCAATGGA ATCCCTCCTT CATCTCTGGC CGCTGTTNNN NNNNNNNNNN 60
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR022764--Peptidase_S54_rhomboid_dom

Pfam

PF01694--Rhomboid

Gene Ontology

GO:0000139--C:Golgi membrane
GO:0016021--C:integral component of membrane
GO:0005654--C:nucleoplasm
GO:0048471--C:perinuclear region of cytoplasm
GO:0004252--F:serine-type endopeptidase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003104	Amborella trichopoda	26.97	1.00e-07	51.60
IUUC-Aly-006262	Arabidopsis lyrata	27.49	2.00e-05	43.50
IUUC-Ath-006650	Arabidopsis thaliana	27.49	2.00e-05	43.90
IUUC-Bgr-012264	Blumeria graminis	36.84	1.00e-03	37.00
IUUC-Bci-013845	Botrytis cinerea	30.26	4.00e-04	38.10
IUUC-Bdi-014166	Brachypodium distachyon	24.81	2.00e-04	39.70
IUUC-Bol-015488	Brassica oleracea	28.14	8.00e-11	62.00
IUUC-Bra-017302	Brassica rapa	28.74	4.00e-11	62.40
IUUC-Cre-022648	Chlamydomonas reinhardtii	28.92	2.00e-05	43.50
IUUC-Dse-031546	Dothistroma septosporum	26.88	5.60e-02	30.80
IUUC-Fox-037841	Fusarium oxysporum	32.43	1.20e-02	33.10
IUUC-Fso-038300	Fusarium solani	23.16	1.00e-05	42.40
IUUC-Gma-043194	Glycine max	25.97	4.00e-03	35.80
IUUC-Hvu-047778	Hordeum vulgare	26.36	1.00e-04	40.80
IUUC-Itr-048333	Ictidomys tridecemlineatus	81.88	2.00e-125	441.00
IUUC-Lpe-051525	Leersia perrieri	28.74	2.00e-08	52.80
IUUC-Mtr-058025	Medicago truncatula	27.59	6.00e-04	38.50
IUUC-Oba-075871	Oryza barthii	23.61	4.20e-02	32.30
IUUC-Obr-076568	Oryza brachyantha	27.27	1.00e-07	51.20
IUUC-Ogl-077534	Oryza glaberrima	26.71	8.00e-05	41.20
IUUC-Ogu-078204	Oryza glumaepatula	23.61	4.40e-02	32.30
IUUC-Oin-079209	Oryza indica	26.71	8.00e-05	41.20
IUUC-Opu-083685	Oryza punctata	25.73	1.20e-02	33.90
IUUC-Osa-086297	Oryza sativa	26.71	8.00e-05	41.20
IUUC-Pno-095121	Phaeosphaeria nodorum	24.18	6.60e-02	30.00
IUUC-Ppa-095438	Physcomitrella patens	26.95	1.00e-06	47.40
IUUC-Pop-099200	Populus trichocarpa	25.32	2.00e-07	50.10
IUUC-Ppe-101907	Prunus persica	25.43	3.00e-07	49.70
IUUC-Ssl-108652	Sclerotinia sclerotiorum	30.38	3.00e-04	38.90
IUUC-Smo-109633	Selaginella moellendorffii	23.31	9.00e-06	44.30
IUUC-Sit-110586	Setaria italica	27.92	2.00e-08	53.10
IUUC-Sly-111682	Solanum lycopersicum	25.66	3.30e-02	32.70
IUUC-Sbi-114385	Sorghum bicolor	27.27	4.00e-08	52.00
IUUC-Tca-120985	Theobroma cacao	26.97	1.00e-06	47.40
IUUC-Tvi-122530	Trichoderma virens	26.97	4.00e-05	41.20
IUUC-Tae-125486	Triticum aestivum	26.36	8.00e-05	41.20
IUUC-Tur-126741	Triticum urartu	25.23	1.00e-02	33.90
IUUC-Ttr-128782	Tursiops truncatus	84.66	8.00e-165	572.00
IUUC-Vvi-131200	Vitis vinifera	25.66	9.00e-07	47.80
IUUC-Yli-134620	Yarrowia lipolytica	28.41	6.00e-07	47.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence