iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043488

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000847

Gene Name

LOC100781044; GLYMA_14G003700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA14G00670	GLYMA14G00670.1	GLYMA14G00670.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.20e-09	39.3	120	159
E3 activity/RING/U-box	2.30e-09	38.8	118	165

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++ +++ p+++pCgH f++ C++kw       +++ +C  Cr
   Q: 120  CSICMQLPDR-PVTTPCGHNFCLRCFEKW-----IGQGKRTCANCR 159
           **********.9*****************.....689999999997 PP

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpltee 53
           ++C+I ++l+  Pv++p+G+ +  ++ ekw+ +g++tc  +r+++  +
   Q: 118  LNCSICMQLPDRPVTTPCGHNFCLRCFEKWIGQGKRTCANCRAQIPTK 165
           68**************************************99998554 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MAQLPCDSDG VCMLCKLKPS PSQTLSCGTC ATPWHLPCLP SPPLSLSDSH WDCPDCSDTF 60
CHHPVAPTAH LVSAIHAIQA DTSLTDQQKA IKRQQLLAGS AHPSKDKTKA KDIFDGSLNC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGAACTGAG AAGCGAAAGG GCGCGAGGGG GAAATGGCGA AATGGAGGGA GGGAAAGGAA 60
AATATTCAAA AGGCTGATTC CCTCGCTCCG GAAAATCAGA AATTTGGATA CTTTTCCCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR015947--PUA-like_domain
IPR003105--SRA_YDG
IPR019786--Zinc_finger_PHD-type_CS
IPR027370--Znf-RING_LisH
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51015--YDG
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02182--SAD_SRA
PF13445--zf-RING_UBOX

SMART

SM00249--PHD
SM00184--RING
SM00466--SRA

Gene Ontology

GO:0005720--C:nuclear heterochromatin
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0010216--P:maintenance of DNA methylation
GO:0016567--P:protein ubiquitination
GO:0090308--P:regulation of methylation-dependent chromatin silencing

KEGG

gmx:100781044

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ncr-068857	Neurospora crassa	27.20	2.00e-08	55.10
IUUC-Pno-094854	Phaeosphaeria nodorum	40.68	2.00e-05	43.90
IUUC-Sce-106362	Saccharomyces cerevisiae	32.47	2.00e-07	50.40
IUUC-Smo-109319	Selaginella moellendorffii	54.64	2.00e-177	615.00
IUUC-Sit-110588	Setaria italica	64.06	0.00e+00	758.00
IUUC-Sbi-114726	Sorghum bicolor	66.22	0.00e+00	762.00
IUUC-Sre-115182	Sporisorium reilianum	43.24	5.00e-32	132.00
IUUC-Tvi-122458	Trichoderma virens	26.67	4.00e-04	40.80
IUUC-Tme-127149	Tuber melanosporum	44.92	2.00e-24	107.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence